RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 GPC2Q8N158 579 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 UPF1Q92900 1129 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 SAAL1Q96ER3 474 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 IRF6O14896 467 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 GFPT2O94808 682 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 PON1P27169 355 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 USP8P40818 1118 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 MAPK7Q13164 816 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 EDRF1Q3B7T1 1238 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 TXLNBQ8N3L3 684 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 SLC35C1Q96A29 364 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 DCPSQ96C86 337 aaKnown RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 CEP170P1Q96L14 293 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 PARD6BQ9BYG5 372 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 GEMIN8Q9NWZ8 242 aaKnown RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 SEPT9Q9UHD8 586 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 FRMPD4Q14CM0 1322 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
HDAC7-221ENST00000477203 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 CBWD6Q4V339 395 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 CBWD3Q5JTY5 395 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 CBWD5Q5RIA9 395 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 FIZ1Q96SL8 496 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
HDAC7-221ENST00000477203 TRAF3IP3Q9Y228 551 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 EFCAB8A8MWE9 144 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 RGS20O76081 388 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 GNA14O95837 355 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 TUBB4AP04350 444 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 PGK2P07205 417 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 UCHL3P15374 230 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 GAP43P17677 238 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 OAS2P29728 719 aaKnown RBP14.63□□□□□ -0.07
HDAC7-221ENST00000477203 ASIC2Q16515 512 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 MTERF2Q49AM1 385 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 ZNF526Q8TF50 670 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-221ENST00000477203 GOLGA1Q92805 767 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 TEX13BQ9BXU2 312 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 SUGCTQ9HAC7 445 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 CEP72Q9P209 647 aa14.63□□□□□ -0.07
HDAC7-221ENST00000477203 RPTORQ8N122 1335 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 FTCDO95954 541 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 VAV2P52735 878 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 SUPT20HL1Q3ZLR7 823 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 HGSNATQ68CP4 663 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 CCDC125Q86Z20 511 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 POP1Q99575 1024 aaKnown RBP14.62□□□□□ -0.07
HDAC7-221ENST00000477203 FRMD4BQ9Y2L6 1034 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 CSADQ9Y600 493 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 GCLMP48507 274 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 SP2Q02086 613 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 PTK2Q05397 1052 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 C9orf131Q5VYM1 1079 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 NFRKBQ6P4R8 1299 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 CATSPERGQ6ZRH7 1159 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 SPON1Q9HCB6 807 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 CYP39A1Q9NYL5 469 aa14.62□□□□□ -0.07
HDAC7-221ENST00000477203 LARSQ9P2J5 1176 aaKnown RBP14.62□□□□□ -0.07
HDAC7-221ENST00000477203 RRP15Q9Y3B9 282 aaKnown RBP14.62□□□□□ -0.07
HDAC7-221ENST00000477203 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 ZNF862O60290 1169 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CCND2P30279 289 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 PSMC2P35998 433 aaKnown RBP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 GPS2Q13227 327 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 ANO5Q75V66 913 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 HAUS6Q7Z4H7 955 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 SRGAP1Q7Z6B7 1085 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 VSIG10LQ86VR7 867 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CCDC170Q8IYT3 715 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 RBM46Q8TBY0 533 aaKnown RBP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 NSUN6Q8TEA1 469 aaKnown RBP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 OLFML3Q9NRN5 406 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 SNCAIPQ9Y6H5 919 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 WDR64B1ANS9 1081 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 PSEN1P49768 467 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 KIAA0753Q2KHM9 967 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 B3GNT9Q6UX72 402 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 ACAD9Q9H845 621 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 FAM53CQ9NYF3 392 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 BTBD7Q9P203 1132 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CHORDC1Q9UHD1 332 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 SAR1BQ9Y6B6 198 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CTAGE15A4D2H0 777 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CTAGE8P0CG41 777 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 FIGNQ5HY92 759 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 FRMD5Q7Z6J6 570 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CTAGE6Q86UF2 777 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CCDC60Q8IWA6 550 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 CTAGE4Q8IX94 777 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC7-221ENST00000477203 COG1Q8WTW3 980 aa14.61□□□□□ -0.07
HDAC7-221ENST00000477203 PNKPQ96T60 521 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms