RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 TYRP1P17643 537 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 PTGS2P35354 604 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 SOX6P35712 828 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 MLH1P40692 756 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 CCR3P51677 355 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 POLR2GP62487 172 aaKnown RBP eCLIP6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 PRKG2Q13237 762 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 GNL2Q13823 731 aaKnown RBP6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 TRIM71Q2Q1W2 868 aaKnown RBP6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 ALKBH5Q6P6C2 394 aaKnown RBP6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 CNSTQ6PJW8 725 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 ZDHHC17Q8IUH5 632 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 GTF3C2Q8WUA4 911 aaPredicted RBP6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 EGLN2Q96KS0 407 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 TESK2Q96S53 571 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 MVB12BQ9H7P6 319 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 KIAA1586Q9HCI6 787 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 PREBQ9HCU5 417 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 OBP2AQ9NY56 170 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 MYO6Q9UM54 1294 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 USP20Q9Y2K6 914 aa6.48□□□□□ -1.37
SPTLC3-205ENST00000476791 RIMBP3CA6NJZ7 1639 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 RIMBP3BA6NNM3 1639 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 RIMBP3Q9UFD9 1639 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 UBXN8O00124 270 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CETN3O15182 167 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 MAPK13O15264 365 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NVLO15381 856 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 FOXP2O15409 715 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 HSPA4LO95757 839 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ADH7P40394 386 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CRKP46108 304 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 FXR1P51114 621 aaKnown RBP eCLIP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PICALMQ13492 652 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 MTMR1Q13613 665 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CUL3Q13618 768 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 WLSQ5T9L3 541 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 GKAP1Q5VSY0 366 aaPredicted RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PPP1R21Q6ZMI0 780 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ARHGAP36Q6ZRI8 547 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CEP128Q6ZU80 1094 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 USP51Q70EK9 711 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC22A9Q8IVM8 553 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CD302Q8IX05 232 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NEDD1Q8NHV4 660 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TRPC4APQ8TEL6 797 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NCLNQ969V3 563 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF566Q969W8 418 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TTC17Q96AE7 1141 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 HOOK2Q96ED9 719 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ABHD8Q96I13 439 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 VCPIP1Q96JH7 1222 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 AIFM3Q96NN9 605 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 YME1L1Q96TA2 773 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PIP5K1AQ99755 562 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 DDX50Q9BQ39 737 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CHCHD6Q9BRQ6 235 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 VPS11Q9H270 941 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 RHBGQ9H310 441 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 EHMT1Q9H9B1 1298 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 RPH3AQ9Y2J0 694 aaPredicted RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 CD2APQ9Y5K6 639 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ANKRD65E5RJM6 399 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 SMPD2O60906 423 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 IDH1O75874 414 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ATP1A3P13637 1013 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ATF4P18848 351 aaPredicted RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PRKAR1BP31321 381 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 GSTM4Q03013 218 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 DDR1Q08345 913 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NFE2L1Q14494 772 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 STK38Q15208 465 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC14A2Q15849 920 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TEX35Q5T0J7 233 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 RALYLQ86SE5 291 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 FAM83AQ86UY5 434 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 IRGQQ8WZA9 623 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PEX13Q92968 403 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 SGK3Q96BR1 496 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 OSBPL9Q96SU4 736 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NUDT16L1Q9BRJ7 211 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TSEN34Q9BSV6 310 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TRIM5Q9C035 493 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 ZWILCHQ9H900 591 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 NEUROD4Q9HD90 331 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PRM3Q9NNZ6 103 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TRPM5Q9NZQ8 1165 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PPARGC1AQ9UBK2 798 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 TMEM5Q9Y2B1 443 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
SPTLC3-205ENST00000476791 SYNJ2BP-COX16A0A087WUM0 186 aa6.46□□□□□ -1.38
SPTLC3-205ENST00000476791 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.38
SPTLC3-205ENST00000476791 GRIN3BO60391 1043 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms