RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 TBKBP1A7MCY6 615 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 JAK2O60674 1132 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEC13-214ENST00000476597 MMP1P03956 469 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 ITGB1P05556 798 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
SEC13-214ENST00000476597 IBSPP21815 317 aaPredicted RBP12.12□□□□□ -0.47
SEC13-214ENST00000476597 DNM2P50570 870 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 EPHA7Q15375 998 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 KLHL23Q8NBE8 558 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 PABPC5Q96DU9 382 aaKnown RBP12.12□□□□□ -0.47
SEC13-214ENST00000476597 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
SEC13-214ENST00000476597 TYW1Q9NV66 732 aaKnown RBP12.12□□□□□ -0.47
SEC13-214ENST00000476597 SIP14410 1827 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 MARCH6O60337 910 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 DNAJB1P25685 340 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 ST3GAL1Q11201 340 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 JPH2Q9BR39 696 aaPredicted RBP12.11□□□□□ -0.47
SEC13-214ENST00000476597 GCOM2Q9BZD3 368 aaPredicted RBP12.11□□□□□ -0.47
SEC13-214ENST00000476597 CYP26B1Q9NR63 512 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 SUCLA2Q9P2R7 463 aaPredicted RBP12.11□□□□□ -0.47
SEC13-214ENST00000476597 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
SEC13-214ENST00000476597 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
SEC13-214ENST00000476597 A0A087WZ62 844 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 HOXA2O43364 376 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 CSDE1O75534 798 aaKnown RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 SLITRK3O94933 977 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 FGFR1P11362 822 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 FGFR4P22455 802 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 LTBRP36941 435 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 NPEPPSP55786 919 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 HYAL1Q12794 435 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 ZNF410Q86VK4 478 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 POF1BQ8WVV4 589 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 SCLT1Q96NL6 688 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 CASD1Q96PB1 797 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 CWH43Q9H720 699 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 RNF19AQ9NV58 838 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 RGL1Q9NZL6 768 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 PCDHB12Q9Y5F1 795 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 MYO7AQ13402 2215 aa12.1□□□□□ -0.47
SEC13-214ENST00000476597 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
SEC13-214ENST00000476597 H3BQ06 376 aaPredicted RBP12.09□□□□□ -0.47
SEC13-214ENST00000476597 EOMESO95936 686 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 IL9P15248 144 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 IRS1P35568 1242 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 UBE3AQ05086 875 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 ADAM15Q13444 863 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 TRIM29Q14134 588 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
SEC13-214ENST00000476597 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 LRRC55Q6ZSA7 311 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
SEC13-214ENST00000476597 RHPN2Q8IUC4 686 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 DYDC2Q96IM9 177 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 CEP170P1Q96L14 293 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 KIF2CQ99661 725 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 HSD17B14Q9BPX1 270 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 LXNQ9BS40 222 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 TRAIPQ9BWF2 469 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 INO80BQ9C086 356 aaPredicted RBP12.09□□□□□ -0.47
SEC13-214ENST00000476597 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
SEC13-214ENST00000476597 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 CLDND1Q9NY35 253 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
SEC13-214ENST00000476597 ZBTB39O15060 712 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 FGF18O76093 207 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 YWHABP31946 246 aaKnown RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 GTF2F1P35269 517 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEC13-214ENST00000476597 RFC5P40937 340 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 DLX2Q07687 328 aaPredicted RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 CTTNQ14247 550 aaKnown RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 NCAPH2Q6IBW4 605 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms