RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SARSP49591 514 aaKnown RBP23.68■■□□□ 1.38
LIME1-204ENST00000476183 EPC2Q52LR7 807 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 ODR4Q5SWX8 454 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 FIBCD1Q8N539 461 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 FBXO22Q8NEZ5 403 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 NLRP7Q8WX94 980 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 DHX33Q9H6R0 707 aaKnown RBP23.68■■□□□ 1.38
LIME1-204ENST00000476183 RGS18Q9NS28 235 aa23.68■■□□□ 1.38
LIME1-204ENST00000476183 CUL9Q8IWT3 2517 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 DENND3A2RUS2 1198 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 C9IYK1 514 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 CSDE1O75534 798 aaKnown RBP23.67■■□□□ 1.38
LIME1-204ENST00000476183 IBSPP21815 317 aaPredicted RBP23.67■■□□□ 1.38
LIME1-204ENST00000476183 FGFR4P22455 802 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 GJB2P29033 226 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 GATMP50440 423 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 DNM2P50570 870 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 TOB1P50616 345 aaPredicted RBP23.67■■□□□ 1.38
LIME1-204ENST00000476183 KSR1Q8IVT5 923 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 TMEM192Q8IY95 271 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 SCLT1Q96NL6 688 aa23.67■■□□□ 1.38
LIME1-204ENST00000476183 BMP2KQ9NSY1 1161 aaPredicted RBP23.67■■□□□ 1.38
LIME1-204ENST00000476183 RALGAPA2Q2PPJ7 1873 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 A0A087WZ62 844 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 LYPLA2O95372 231 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 OR52Z1P0C646 297 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 TRAPPC10P48553 1259 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 ORC2Q13416 577 aaPredicted RBP23.66■■□□□ 1.38
LIME1-204ENST00000476183 FAM43BQ6ZT52 329 aaPredicted RBP23.66■■□□□ 1.38
LIME1-204ENST00000476183 OTUD6AQ7L8S5 288 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 RHPN2Q8IUC4 686 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 C4orf32Q8N8J7 132 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 TMEM143Q96AN5 459 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 SAMD11Q96NU1 681 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 JPH2Q9BR39 696 aaPredicted RBP23.66■■□□□ 1.38
LIME1-204ENST00000476183 FDXACB1Q9BRP7 624 aaPredicted RBP23.66■■□□□ 1.38
LIME1-204ENST00000476183 C1orf112Q9NSG2 853 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 PPME1Q9Y570 386 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 XIRP2A4UGR9 3374 aa23.66■■□□□ 1.38
LIME1-204ENST00000476183 A0A087WWV3 80 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 STAG3L1P0CL83 205 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 RFC5P40937 340 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 TECP42680 631 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 POLGP54098 1239 aaPredicted RBP23.65■■□□□ 1.38
LIME1-204ENST00000476183 BTG3Q14201 252 aaPredicted RBP23.65■■□□□ 1.38
LIME1-204ENST00000476183 XKR9Q5GH70 373 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 SLC24A5Q71RS6 500 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 NEK9Q8TD19 979 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 SLC7A3Q8WY07 619 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 NOL7Q9UMY1 257 aaKnown RBP23.65■■□□□ 1.38
LIME1-204ENST00000476183 KIF3AQ9Y496 699 aa23.65■■□□□ 1.38
LIME1-204ENST00000476183 MYO7AQ13402 2215 aa23.64■■□□□ 1.38
LIME1-204ENST00000476183 SPATA31C1P0DKV0 1188 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 FAM189BP81408 668 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 CDC42EP1Q00587 391 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 EMC2Q15006 297 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 CLP1Q92989 425 aaKnown RBP23.64■■□□□ 1.37
LIME1-204ENST00000476183 GCOM2Q9BZD3 368 aaPredicted RBP23.64■■□□□ 1.37
LIME1-204ENST00000476183 XPNPEP1Q9NQW7 623 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 LMCD1Q9NZU5 365 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 LRFN2Q9ULH4 789 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 PCDHB7Q9Y5E2 793 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 PCDHB6Q9Y5E3 794 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 MRPL42Q9Y6G3 142 aaKnown RBP23.64■■□□□ 1.37
LIME1-204ENST00000476183 BRWD1Q9NSI6 2320 aa23.64■■□□□ 1.37
LIME1-204ENST00000476183 H3BNC9 293 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 MED24O75448 989 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 FNDC1Q4ZHG4 1894 aaPredicted RBP23.63■■□□□ 1.37
LIME1-204ENST00000476183 PAN2Q504Q3 1202 aaKnown RBP23.63■■□□□ 1.37
LIME1-204ENST00000476183 ZNF410Q86VK4 478 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 CMTR2Q8IYT2 770 aaKnown RBP23.63■■□□□ 1.37
LIME1-204ENST00000476183 PRPF31Q8WWY3 499 aaKnown RBP23.63■■□□□ 1.37
LIME1-204ENST00000476183 NLRP4Q96MN2 994 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 SMC3Q9UQE7 1217 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 COL4A3BPQ9Y5P4 624 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 KIAA1671Q9BY89 1806 aa23.63■■□□□ 1.37
LIME1-204ENST00000476183 CTNNB1P35222 781 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 BMPR1AP36894 532 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 GPM6BQ13491 265 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 FAM102BQ5T8I3 360 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 MCTP1Q6DN14 999 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 CATSPER3Q86XQ3 398 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 EXOC8Q8IYI6 725 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 PIGOQ8TEQ8 1089 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 IFT122Q9HBG6 1241 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 ANKEF1Q9NU02 776 aa23.62■■□□□ 1.37
LIME1-204ENST00000476183 C5orf67F2Z3F1 127 aa23.61■■□□□ 1.37
LIME1-204ENST00000476183 RARRES1P49788 294 aa23.61■■□□□ 1.37
LIME1-204ENST00000476183 PSPC1Q8WXF1 523 aaKnown RBP23.61■■□□□ 1.37
LIME1-204ENST00000476183 TMEM161AQ9NX61 479 aa23.61■■□□□ 1.37
LIME1-204ENST00000476183 FGFR1P11362 822 aa23.6■■□□□ 1.37
LIME1-204ENST00000476183 ZSCAN20P17040 1043 aaPredicted RBP23.6■■□□□ 1.37
LIME1-204ENST00000476183 LAMTOR4Q0VGL1 99 aa23.6■■□□□ 1.37
LIME1-204ENST00000476183 PTGDRQ13258 359 aa23.6■■□□□ 1.37
LIME1-204ENST00000476183 CUL4AQ13619 759 aa23.6■■□□□ 1.37
LIME1-204ENST00000476183 MTRQ99707 1265 aa23.6■■□□□ 1.37
LIME1-204ENST00000476183 POLR3CQ9BUI4 534 aaPredicted RBP23.6■■□□□ 1.37
LIME1-204ENST00000476183 ELAC1Q9H777 363 aaKnown RBP23.6■■□□□ 1.37
LIME1-204ENST00000476183 TUFT1Q9NNX1 390 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms