RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 LRRC71Q8N4P6 559 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 LINC01465Q8N7H1 131 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 CASD1Q96PB1 797 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 PRRX2Q99811 253 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 RNF26Q9BY78 433 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-205ENST00000475944 ADAMTS10Q9H324 1103 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 C5orf42Q9H799 3197 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 DISC1Q9NRI5 854 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 ZNF862O60290 1169 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 GAS7O60861 476 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
CDRT1-205ENST00000475944 CPA1P15085 419 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 HOXB8P17481 243 aaPredicted RBP12.23□□□□□ -0.45
CDRT1-205ENST00000475944 SFNP31947 248 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 TECP42680 631 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 GPC3P51654 580 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 JAK3P52333 1124 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 PTPN5P54829 565 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 SIGLEC14Q08ET2 396 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 KCNC3Q14003 757 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 ANKRD54Q6NXT1 300 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 LRRC55Q6ZSA7 311 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 RNF169Q8NCN4 708 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 PHKBQ93100 1093 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 LENG9Q96B70 501 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
CDRT1-205ENST00000475944 RIT2Q99578 217 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 RNF19AQ9NV58 838 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 SPG21Q9NZD8 308 aa12.23□□□□□ -0.45
CDRT1-205ENST00000475944 A0A0U1RQF3 1178 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 MSH4O15457 936 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 CHMP2AO43633 222 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 EOMESO95936 686 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 USP11P51784 963 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 CDC42EP1Q00587 391 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
CDRT1-205ENST00000475944 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 LRCH2Q5VUJ6 765 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 LLGL2Q6P1M3 1020 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 FBXL16Q8N461 479 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 FBXL6Q8N531 539 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 RDM1Q8NG50 284 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 RSPH1Q8WYR4 309 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 CASP10Q92851 521 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 KCNB2Q92953 911 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 TEKT3Q9BXF9 490 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
CDRT1-205ENST00000475944 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 S1PR5Q9H228 398 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 NR2E1Q9Y466 385 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 TECTAO75443 2155 aa12.22□□□□□ -0.45
CDRT1-205ENST00000475944 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 HIDE1A8MVS5 230 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 IFNAR1P17181 557 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 RPS6KB1P23443 525 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 PSMA5P28066 241 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 HSPA4P34932 840 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 PBX3P40426 434 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
CDRT1-205ENST00000475944 NLRP5P59047 1200 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SMC1AQ14683 1233 aaKnown RBP12.21□□□□□ -0.45
CDRT1-205ENST00000475944 NTRK3Q16288 839 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 UGCGQ16739 394 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 PTPN21Q16825 1174 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 ZBTB33Q86T24 672 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SLC39A11Q8N1S5 342 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 PRSS33Q8NF86 280 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SLC26A6Q9BXS9 759 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-205ENST00000475944 UNC45AQ9H3U1 944 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SH3GLB2Q9NR46 395 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 SNX14Q9Y5W7 946 aa12.21□□□□□ -0.45
CDRT1-205ENST00000475944 FGFR4P22455 802 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 SFPQP23246 707 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 DNM2P50570 870 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 ITIH3Q06033 890 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 TARBP2Q15633 366 aaKnown RBP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 XKR3Q5GH77 459 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 CES5AQ6NT32 575 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 SYCE2Q6PIF2 218 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 MIER3Q7Z3K6 550 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 ZNF598Q86UK7 904 aaKnown RBP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 TRIM22Q8IYM9 498 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms