RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 FAM189BP81408 668 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 CYP4A11Q02928 519 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 CTTNQ14247 550 aaKnown RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 DSC3Q14574 896 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 FAM102BQ5T8I3 360 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 OTUD6AQ7L8S5 288 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 TPH2Q8IWU9 490 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 LXNQ9BS40 222 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 PLVAPQ9BX97 442 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 NSUN3Q9H649 340 aaKnown RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 TMEM161AQ9NX61 479 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 WRAP73Q9P2S5 460 aaPredicted RBP12.84□□□□□ -0.35
GPM6B-208ENST00000475307 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
GPM6B-208ENST00000475307 CDH23Q9H251 3354 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 A0A087WZ62 844 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 CSPG5O95196 566 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 BMP1P13497 986 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 SPIRE1Q08AE8 756 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 XKR9Q5GH70 373 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 NLRP4Q96MN2 994 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 FDXACB1Q9BRP7 624 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 UBE2ZQ9H832 354 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
GPM6B-208ENST00000475307 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 CHD9Q3L8U1 2897 aa12.83□□□□□ -0.36
GPM6B-208ENST00000475307 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 WNT7AO00755 349 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 HOXA2O43364 376 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 FGFR1P11362 822 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
GPM6B-208ENST00000475307 MCM7P33993 719 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 RFC5P40937 340 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 RABEP1Q15276 862 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 EP400NLQ6ZTU2 488 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 ABI1Q8IZP0 508 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 KLHL23Q8NBE8 558 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 P2RX5Q93086 422 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 EIF2AK1Q9BQI3 630 aaKnown RBP12.82□□□□□ -0.36
GPM6B-208ENST00000475307 AAASQ9NRG9 546 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 PLAGL2Q9UPG8 496 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 PCDHB12Q9Y5F1 795 aa12.82□□□□□ -0.36
GPM6B-208ENST00000475307 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 ZBTB39O15060 712 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 ST18O60284 1047 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 SLITRK3O94933 977 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 KCNA5P22460 613 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 FBXO18Q8NFZ0 1043 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 TCP11Q8WWU5 503 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 PSPC1Q8WXF1 523 aaKnown RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 TMEM143Q96AN5 459 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 CCDC43Q96MW1 224 aaKnown RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 TMEM117Q9H0C3 514 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 CHST12Q9NRB3 414 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 TYW1Q9NV66 732 aaKnown RBP12.81□□□□□ -0.36
GPM6B-208ENST00000475307 DACT1Q9NYF0 836 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 TTC3P53804 2025 aa12.81□□□□□ -0.36
GPM6B-208ENST00000475307 GAS2O43903 313 aaKnown RBP12.8□□□□□ -0.36
GPM6B-208ENST00000475307 ITGB1P05556 798 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 EMC2Q15006 297 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 ZNF174Q15697 407 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
GPM6B-208ENST00000475307 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
GPM6B-208ENST00000475307 POF1BQ8WVV4 589 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms