RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 CLCN3P51790 818 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 GRB10Q13322 594 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 KIZQ2M2Z5 673 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 HAS1Q92839 578 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 OSMRQ99650 979 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 RWDD3Q9Y3V2 267 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 NEMFO60524 1076 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 GPR32O75388 356 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 VTNP04004 478 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 DNM2P50570 870 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FOSBP53539 338 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 EPHA7Q15375 998 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FIBCD1Q8N539 461 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 LINC01599Q8WXQ3 324 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 SUGCTQ9HAC7 445 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 C1orf112Q9NSG2 853 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 NOC2LQ9Y3T9 749 aaKnown RBP12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
HLA-DOB-208ENST00000475235 ADGRA3Q8IWK6 1321 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 DENND3A2RUS2 1198 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 EML1O00423 815 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 LPXNO60711 386 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 STBD1O95210 358 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZSCAN20P17040 1043 aaPredicted RBP12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 CALCRLQ16602 461 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMEM40Q8WWA1 233 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 ATXN2LQ8WWM7 1075 aaKnown RBP12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMX1Q9H3N1 280 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 CDHR5Q9HBB8 845 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 KIF3AQ9Y496 699 aa12.87□□□□□ -0.35
HLA-DOB-208ENST00000475235 IGKV6-21A0A0C4DH24 114 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 DGKIO75912 1065 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 SARSP49591 514 aaKnown RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 GPC3P51654 580 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 GNL2Q13823 731 aaKnown RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 BTG3Q14201 252 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 PTPROQ16827 1216 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ANO5Q75V66 913 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 RTN4RL1Q86UN2 441 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 FAM228AQ86W67 206 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMEM192Q8IY95 271 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 FBXO18Q8NFZ0 1043 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 NEK9Q8TD19 979 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ITFG2Q969R8 447 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZNF689Q96CS4 500 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 PPP1R16BQ96T49 567 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 LXNQ9BS40 222 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ADAMTS10Q9H324 1103 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 RGS18Q9NS28 235 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
HLA-DOB-208ENST00000475235 EYSQ5T1H1 3165 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 DLL1O00548 723 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 RB1P06400 928 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 MCM2P49736 904 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 CMTR2Q8IYT2 770 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms