RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C4orf50Q6ZRC1 276 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 LCA5Q86VQ0 697 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ZNF34Q8IZ26 560 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PLBD2Q8NHP8 589 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 GDF15Q99988 308 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 BRD8Q9H0E9 1235 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 SAR1AQ9NR31 198 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 NMRK1Q9NWW6 199 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 STX18Q9P2W9 335 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 DIS3Q9Y2L1 958 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 MYO3BQ8WXR4 1341 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 UBR3Q6ZT12 1888 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PHF20L1A8MW92 1017 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 E9PBE3 544 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 H3BQV1 296 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 APBB1O00213 710 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 DENRO43583 198 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 SERPINB7O75635 380 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 DEXIO95424 95 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 POLR3DP05423 398 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 ABHD2P08910 425 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 IL15P40933 162 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 SSR1P43307 286 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 SLC7A5Q01650 507 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ATP2B2Q01814 1243 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 MYO1EQ12965 1108 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 DDB1Q16531 1140 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 INF2Q27J81 1249 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 IFFO2Q5TF58 517 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 KIRREL3Q8IZU9 778 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 BBS5Q8N3I7 341 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 METTL25Q8N6Q8 603 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 LMO3Q8TAP4 145 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 RBM46Q8TBY0 533 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 PTCD2Q8WV60 388 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 NELFBQ8WX92 580 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PSPC1Q8WXF1 523 aaKnown RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 RANBP9Q96S59 729 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CGREF1Q99674 301 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 CCT7Q99832 543 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 SLC52A2Q9HAB3 445 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 ZSWIM5Q9P217 1185 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 AJAP1Q9UKB5 411 aaPredicted RBP4.47□□□□□ -1.69
USP16-205ENST00000474835 LRCH1Q9Y2L9 728 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 DAAM1Q9Y4D1 1078 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
USP16-205ENST00000474835 IGF2BP3O00425 579 aaKnown RBP eCLIP4.46□□□□□ -1.69
USP16-205ENST00000474835 RSL1D1O76021 490 aaKnown RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 HEXIM1O94992 359 aaKnown RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 KIF4AO95239 1232 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 MOCS3O95396 460 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 C8BP07358 591 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 EZRP15311 586 aaKnown RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 SMARCA1P28370 1054 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 CASP1P29466 404 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 L1CAMP32004 1257 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 ALDH3B2P48448 385 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 CDK7P50613 346 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 CLNS1AP54105 237 aaKnown RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 CES4AQ5XG92 561 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 KYAT3Q6YP21 454 aaKnown RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 TMEM126BQ8IUX1 230 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 ARFGAP2Q8N6H7 521 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 GIMAP7Q8NHV1 300 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 TPCN2Q8NHX9 752 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 SGF29Q96ES7 293 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 ZNF641Q96N77 438 aaPredicted RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 DENND2DQ9H6A0 471 aaPredicted RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 USP29Q9HBJ7 922 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 KIAA1586Q9HCI6 787 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 ERVK-5Q9HDB9 667 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 QPCTLQ9NXS2 382 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 CEP72Q9P209 647 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 PNMA3Q9UL41 463 aa4.46□□□□□ -1.69
USP16-205ENST00000474835 USP15Q9Y4E8 981 aaPredicted RBP4.46□□□□□ -1.69
USP16-205ENST00000474835 KIAA1671Q9BY89 1806 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 FAM155AB1AL88 458 aaPredicted RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 H3BNX3 289 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 EYA2O00167 538 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 RIPK2O43353 540 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 NRDCO43847 1150 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 HSF2BPO75031 334 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ZBED1O96006 694 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CDK4P11802 303 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CHN1P15882 459 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 PPP1R2P41236 205 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 PTDSS1P48651 473 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 CEBPAP49715 358 aaPredicted RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 HPCAP84074 193 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 NR5A1Q13285 461 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 MTMR3Q13615 1198 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ITGA9Q13797 1035 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ZNF423Q2M1K9 1284 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 VWA3BQ502W6 1294 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 TTC27Q6P3X3 843 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 KRT26Q7Z3Y9 468 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 SMYD4Q8IYR2 804 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms