RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PGK1P00558 417 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 RSPH10BP0C881 870 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 MAPTP10636 758 aaKnown RBP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 PRCPP42785 496 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 PSEN2P49810 448 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 PEX3P56589 373 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 GJA9P57773 515 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 BEX3Q00994 111 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 STRN3Q13033 797 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 KIAA0753Q2KHM9 967 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 IER5Q5VY09 327 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 HS2ST1Q7LGA3 356 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 LUZP1Q86V48 1076 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 ZBTB8OSQ8IWT0 167 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 GUF1Q8N442 669 aaKnown RBP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 BICD1Q96G01 975 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 AKT3Q9Y243 479 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 CABYRO75952 493 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 F2P00734 622 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 HOXD8P13378 290 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 INSRRP14616 1297 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 ATP4AP20648 1035 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 CCNE1P24864 410 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 NAMPTP43490 491 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 ZNF131P52739 623 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 STX17P56962 302 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 RTP1P59025 263 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 SPAG1Q07617 926 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 STK4Q13043 487 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 TRIM32Q13049 653 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 HSP90AA2PQ14568 343 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 GRIK4Q16099 956 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 CTU1Q7Z7A3 348 aaKnown RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 GAS2L3Q86XJ1 694 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 NELFCDQ8IXH7 590 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 P2RX5Q93086 422 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 HVCN1Q96D96 273 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 ACCSQ96QU6 501 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 TMEM206Q9H813 350 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
PRPF38A-202ENST00000474048 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 M0QZ92 97 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 ASAP2O43150 1006 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 ADCY6O43306 1168 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 CBFA2T2O43439 604 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SERPINC1P01008 464 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 PTGS1P23219 599 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 LRRC41Q15345 812 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 FILIP1LQ4L180 1135 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 EFCAB12Q6NXP0 572 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 RSPH3Q86UC2 560 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 CSGALNACT2Q8N6G5 542 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 KIAA0895Q8NCT3 520 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 RNPEPQ9H4A4 650 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 GPRC5CQ9NQ84 441 aa11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 SUCLA2Q9P2R7 463 aaPredicted RBP11.31□□□□□ -0.6
PRPF38A-202ENST00000474048 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 PES1O00541 588 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 SLC16A4O15374 487 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 STBD1O95210 358 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 IGHA2P01877 340 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 MYBP10242 640 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 BMP6P22004 513 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms