RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LOXHD1Q8IVV2 1947 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 CACNA1BQ00975 2339 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 LAMA1P25391 3075 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 NFASCO94856 1347 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 DENND3A2RUS2 1198 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 SPDYE3A6NKU9 549 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ZBTB42B2RXF5 422 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 E7EWF7 191 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PLEKHA8P1O95397 391 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 FGFR1P11362 822 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 LAG3P18627 525 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 SDHBP21912 280 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 SMARCA1P28370 1054 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 KIF5BP33176 963 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PBX3P40426 434 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 SLC26A2P50443 739 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 STAT5BP51692 787 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 FAM189BP81408 668 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PLCB3Q01970 1234 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PTH1RQ03431 593 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ITGB3BPQ13352 177 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 KCNT2Q6UVM3 1135 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 FAM228AQ86W67 206 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 MB21D2Q8IYB1 491 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ZNF654Q8IZM8 581 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 SRBD1Q8N5C6 995 aaKnown RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 NCOA7Q8NI08 942 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 CTCFLQ8NI51 663 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 CYP2W1Q8TAV3 490 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 CASP10Q92851 521 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 NKD2Q969F2 451 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 NECTIN4Q96NY8 510 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 CASD1Q96PB1 797 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 MXRA8Q9BRK3 442 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 LZTS2Q9BRK4 669 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM117Q9H0C3 514 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ADAM7Q9H2U9 754 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ATP6V0A4Q9HBG4 840 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 LY9Q9HBG7 655 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM161AQ9NX61 479 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PCDHA6Q9UN73 950 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ST3GAL5Q9UNP4 418 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 PCDHA8Q9Y5H6 950 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 HCFC2Q9Y5Z7 792 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 ACACBO00763 2458 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 GPR179Q6PRD1 2367 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 OTOGLQ3ZCN5 2332 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 MYO10Q9HD67 2058 aa5.86□□□□□ -1.47
SNRNP40-204ENST00000474025 FRYQ5TBA9 3013 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ZZEF1O43149 2961 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CHD6Q8TD26 2715 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CHD8Q9HCK8 2581 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 SPTBN2O15020 2390 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 COL1A2P08123 1366 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 IGKV6D-21A0A0A0MT36 114 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 GPR182O15218 404 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 HBP1O60381 514 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ATG7O95352 703 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CCNE2O96020 404 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 IGHDP01880 384 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ASGR2P07307 311 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ARP10275 920 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 GSPT1P15170 499 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 KLRC1P26715 233 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 PPM1AP35813 382 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 GNAQP50148 359 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CLCN5P51795 746 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CRYBB1P53674 252 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ITIH3Q06033 890 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 COL9A3Q14050 684 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 DSC3Q14574 896 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CWF19L1Q69YN2 538 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CES5AQ6NT32 575 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 DGLUCYQ7Z3D6 616 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 TMC7Q7Z402 723 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 FRMD5Q7Z6J6 570 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CCDC60Q8IWA6 550 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 HOMEZQ8IX15 550 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 CMTR1Q8N1G2 835 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 LRRC43Q8N309 656 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 MRPL43Q8N983 215 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 PPP1R16BQ96T49 567 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 OSMRQ99650 979 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 SDF4Q9BRK5 362 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 ELAC1Q9H777 363 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 AGO4Q9HCK5 861 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 PUF60Q9UHX1 559 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 WDFY3Q8IZQ1 3526 aa5.85□□□□□ -1.47
SNRNP40-204ENST00000474025 C2orf71A6NGG8 1288 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 MEIS1O00470 390 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 SH2B2O14492 632 aaPredicted RBP5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 HOXA2O43364 376 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms