RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 DHX58Q96C10 678 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 CDK5RAP3Q96JB5 506 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 LXNQ9BS40 222 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC93-207ENST00000474006 NT5C3AQ9H0P0 336 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 RNF208Q9H0X6 261 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
CCDC93-207ENST00000474006 RNPEPQ9H4A4 650 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 SMARCAD1Q9H4L7 1026 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 NRBP2Q9NSY0 501 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 DACT1Q9NYF0 836 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
CCDC93-207ENST00000474006 MYH6P13533 1939 aa8.46□□□□□ -1.05
CCDC93-207ENST00000474006 H3BRB1 525 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ZEB2O60315 1214 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KPNA6O60684 536 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 DKC1O60832 514 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ADAMTS4O75173 837 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 LGALS2P05162 132 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 MYL3P08590 195 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 SLFN14P0C7P3 912 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 MARK3P27448 753 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 YWHABP31946 246 aaKnown RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 GGCXP38435 758 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 STAT6P42226 847 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 AGERQ15109 404 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KCNA10Q16322 511 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 SKOR2Q2VWA4 1001 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 CCSAPQ6IQ19 270 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KRBA2Q6ZNG9 492 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ANO5Q75V66 913 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 OTUD6AQ7L8S5 288 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KCNK18Q7Z418 384 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 TRIM50Q86XT4 487 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ARRDC4Q8NCT1 418 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 CNNM3Q8NE01 707 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KAT2BQ92831 832 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ARMC5Q96C12 935 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 PAGE5Q96GU1 130 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ZNF333Q96JL9 665 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 DEFB118Q96PH6 123 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 C16orf70Q9BSU1 422 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 PAK6Q9NQU5 681 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-207ENST00000474006 BLOC1S4Q9NUP1 217 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ERAP1Q9NZ08 941 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 USP25Q9UHP3 1055 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 SYNRGQ9UMZ2 1314 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 KDM3AQ9Y4C1 1321 aa8.46□□□□□ -1.06
CCDC93-207ENST00000474006 ZNF236Q9UL36 1845 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 TMEM150BA6NC51 233 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 EYA4O95677 639 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 MBD3O95983 291 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 TFRCP02786 760 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 PLA2G4BP0C869 781 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 ZNF286BP0CG31 522 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 AFMP43652 599 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 SLC26A2P50443 739 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 NPEPPSP55786 919 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 SH3BP2P78314 561 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 PURAQ00577 322 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 PRKCEQ02156 737 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 DHX8Q14562 1220 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 LRRC41Q15345 812 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 CAMK4Q16566 473 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 XKR3Q5GH77 459 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 RNF180Q86T96 592 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 CEP57L1Q8IYX8 460 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 SYT2Q8N9I0 419 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 PCSK9Q8NBP7 692 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 ATP8B4Q8TF62 1192 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 RAD54LQ92698 747 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 STAMQ92783 540 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 TIGD1Q96MW7 591 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 SH2D3AQ9BRG2 576 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 NIFKQ9BYG3 293 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 MCOLN1Q9GZU1 580 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 BHMT2Q9H2M3 363 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 CUEDC2Q9H467 287 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 ANKEF1Q9NU02 776 aa8.45□□□□□ -1.06
CCDC93-207ENST00000474006 DBR1Q9UK59 544 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
CCDC93-207ENST00000474006 MYMKA6NI61 221 aa8.44□□□□□ -1.06
CCDC93-207ENST00000474006 HBP1O60381 514 aa8.44□□□□□ -1.06
CCDC93-207ENST00000474006 SGPL1O95470 568 aa8.44□□□□□ -1.06
CCDC93-207ENST00000474006 ASGR1P07306 291 aa8.44□□□□□ -1.06
CCDC93-207ENST00000474006 CST5P28325 142 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-207ENST00000474006 SLC12A3P55017 1021 aa8.44□□□□□ -1.06
CCDC93-207ENST00000474006 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms