RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ODF1Q14990 250 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SAFBQ15424 915 aaKnown RBP eCLIP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SEC23AQ15436 765 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SYCP2LQ5T4T6 812 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SLFN12LQ6IEE8 588 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 KIAA1841Q6NSI8 718 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SRGAP1Q7Z6B7 1085 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ZC3H18Q86VM9 953 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 CMIPQ8IY22 773 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 CLEC4DQ8WXI8 215 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 JADE3Q92613 823 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 TOE1Q96GM8 510 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 FAM193BQ96PV7 902 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 MAP3K14Q99558 947 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ANO3Q9BYT9 981 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 POFUT1Q9H488 388 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 NSUN3Q9H649 340 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ZNF277Q9NRM2 450 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 DTLQ9NZJ0 730 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 FBLN5Q9UBX5 448 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 USP25Q9UHP3 1055 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 TELO2Q9Y4R8 837 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA9Q9Y5G4 932 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA8Q9Y5G5 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA7Q9Y5G6 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA6Q9Y5G7 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA3Q9Y5H0 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PPP2R3BQ9Y5P8 575 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ANO9A1A5B4 782 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 ABLIM1O14639 778 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 AP1G1O43747 822 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 NDUFS2O75306 463 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 PRPF6O94906 941 aaKnown RBP5.38□□□□□ -1.55
BRCA1-212ENST00000473961 PRLP01236 227 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 XPAP23025 273 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-212ENST00000473961 HTRA3P83110 453 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 GRIN1Q05586 938 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-212ENST00000473961 MOGSQ13724 837 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 CCDC178Q5BJE1 867 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 CT83Q5H943 113 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 FAM180AQ6UWF9 173 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 PRRT2Q7Z6L0 340 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-212ENST00000473961 PJA1Q8NG27 643 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 OR14C36Q8NHC7 312 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 SLC35G2Q8TBE7 412 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 EAF2Q96CJ1 260 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-212ENST00000473961 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 DIRC2Q96SL1 478 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 KCNK12Q9HB15 430 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 EDARQ9UNE0 448 aa5.38□□□□□ -1.55
BRCA1-212ENST00000473961 TCAF2A6NFQ2 919 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 RASSF10A6NK89 507 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 NRP2O60462 931 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ZRANB2O95218 330 aaKnown RBP eCLIP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 RPLP2P05387 115 aaKnown RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ENO2P09104 434 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 OSMP13725 252 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 PTGS1P23219 599 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 GPR15P49685 360 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 LINC00310P59036 64 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ERVFRD-1P60508 538 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ALDH6A1Q02252 535 aaKnown RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 MUM1Q2TAK8 710 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 UAP1L1Q3KQV9 507 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ETV3LQ6ZN32 361 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SIRT2Q8IXJ6 389 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 FAM126BQ8IXS8 530 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 RBM12BQ8IXT5 1001 aaKnown RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 THEMISQ8N1K5 641 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 CAMKK1Q8N5S9 505 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ARRDC4Q8NCT1 418 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ABHD4Q8TB40 342 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 RUNDC1Q96C34 613 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 KIRREL1Q96J84 757 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 MYL10Q9BUA6 226 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ACE2Q9BYF1 805 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SLC6A17Q9H1V8 727 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 ZCCHC4Q9H5U6 513 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 HSPBP1Q9NZL4 362 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SYNPO2Q9UMS6 1093 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SMG5Q9UPR3 1016 aaKnown RBP5.37□□□□□ -1.55
BRCA1-212ENST00000473961 SIT1Q9Y3P8 196 aa5.37□□□□□ -1.55
BRCA1-212ENST00000473961 PRSS38A1L453 326 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 ZC3H12DA2A288 527 aaKnown RBP5.36□□□□□ -1.55
BRCA1-212ENST00000473961 PRAMEF22A3QJZ6 481 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 NOTOA8MTQ0 251 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 ACOT7O00154 380 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 POU2F2P09086 479 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 CLEC2LP0C7M8 214 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms