RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NPTX2P47972 431 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 NCKAP1LP55160 1127 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 FKBP1BP68106 108 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 TCERG1LQ5VWI1 586 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 HS2ST1Q7LGA3 356 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 FAM186BQ8IYM0 893 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 BAP1Q92560 729 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 COPS5Q92905 334 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 SLC35C1Q96A29 364 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 IRX2Q9BZI1 471 aaPredicted RBP19.75■□□□□ 0.75
VARS2-206ENST00000473916 PCIF1Q9H4Z3 704 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 PDGFCQ9NRA1 345 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 ADGRA3Q8IWK6 1321 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 IGKV6D-21A0A0A0MT36 114 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 LRRC53A6NM62 1247 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 ACTN1P12814 892 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 XRCC5P13010 732 aaKnown RBP19.75■□□□□ 0.75
VARS2-206ENST00000473916 NFIL3Q16649 462 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 CBWD1Q9BRT8 395 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 TIPINQ9BVW5 301 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 NLRC4Q9NPP4 1024 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 DDX41Q9UJV9 622 aaKnown RBP19.75■□□□□ 0.75
VARS2-206ENST00000473916 FAM184BQ9ULE4 1060 aa19.75■□□□□ 0.75
VARS2-206ENST00000473916 TRPM7Q96QT4 1865 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 OATP04181 439 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 MAPTP10636 758 aaKnown RBP19.74■□□□□ 0.75
VARS2-206ENST00000473916 GTF2BQ00403 316 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 XKR3Q5GH77 459 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 RRAGAQ7L523 313 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 TRIM50Q86XT4 487 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 RDH13Q8NBN7 331 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 TMEM161BQ8NDZ6 487 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 SHCBP1Q8NEM2 672 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 NEK11Q8NG66 645 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 PRIMPOLQ96LW4 560 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 TFR2Q9UP52 801 aa19.74■□□□□ 0.75
VARS2-206ENST00000473916 AFPP02771 609 aaKnown RBP19.73■□□□□ 0.75
VARS2-206ENST00000473916 SLC9A1P19634 815 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 TCF7P36402 384 aaPredicted RBP19.73■□□□□ 0.75
VARS2-206ENST00000473916 HSDL1Q3SXM5 330 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 DPY19L2P1Q6NXN4 242 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 TSC1Q92574 1164 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 ACCSQ96QU6 501 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 DKC1O60832 514 aaKnown RBP eCLIP19.73■□□□□ 0.75
VARS2-206ENST00000473916 DGAT1O75907 488 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 ECM2O94769 699 aaPredicted RBP19.73■□□□□ 0.75
VARS2-206ENST00000473916 NDUFA10O95299 355 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 ADORA2AP29274 412 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 PSMC2P35998 433 aaKnown RBP19.73■□□□□ 0.75
VARS2-206ENST00000473916 ETF1P62495 437 aaKnown RBP19.73■□□□□ 0.75
VARS2-206ENST00000473916 NEDD9Q14511 834 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 METTL7BQ6UX53 244 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 ANKRD23Q86SG2 305 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 MYRIPQ8NFW9 859 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 WDR24Q96S15 920 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 MLXIPQ9HAP2 919 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 ATP6V0A4Q9HBG4 840 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 DNAI1Q9UI46 699 aa19.73■□□□□ 0.75
VARS2-206ENST00000473916 TRIM49P0CI25 452 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 TRIM49CP0CI26 452 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 POLR2FP61218 127 aaKnown RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 EMC2Q15006 297 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 TSR1Q2NL82 804 aaKnown RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 ZNF397Q8NF99 534 aaPredicted RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 TMEM143Q96AN5 459 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 CEP89Q96ST8 783 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 POLR3FQ9H1D9 316 aaPredicted RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 ST6GALNAC4Q9H4F1 302 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 NHEJ1Q9H9Q4 299 aaPredicted RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 SLC45A1Q9Y2W3 748 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 EPN1Q9Y6I3 576 aaPredicted RBP19.72■□□□□ 0.75
VARS2-206ENST00000473916 DOCK3Q8IZD9 2030 aa19.72■□□□□ 0.75
VARS2-206ENST00000473916 ANKRD63C9JTQ0 380 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 EXOC3O60645 756 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 ITGBL1O95965 494 aaPredicted RBP19.71■□□□□ 0.75
VARS2-206ENST00000473916 TGFB3P10600 412 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 GJC2Q5T442 439 aaPredicted RBP19.71■□□□□ 0.75
VARS2-206ENST00000473916 PDXDC1Q6P996 788 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 ARMCX2Q7L311 632 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 KIF18AQ8NI77 898 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 GANQ9H2C0 597 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 METTL14Q9HCE5 456 aaKnown RBP19.71■□□□□ 0.75
VARS2-206ENST00000473916 KMT5AQ9NQR1 393 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 ARHGAP20Q9P2F6 1191 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 PLAGL2Q9UPG8 496 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 DENND3A2RUS2 1198 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 MARK3P27448 753 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 ALCAMQ13740 583 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 CELF3Q5SZQ8 465 aaKnown RBP19.71■□□□□ 0.75
VARS2-206ENST00000473916 CCDC62Q6P9F0 684 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 MORC4Q8TE76 937 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 GPR20Q99678 358 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 TMEM206Q9H813 350 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 TRIM10Q9UDY6 481 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 AJAP1Q9UKB5 411 aaPredicted RBP19.71■□□□□ 0.75
VARS2-206ENST00000473916 TBX20Q9UMR3 447 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 FRMD4BQ9Y2L6 1034 aa19.71■□□□□ 0.75
VARS2-206ENST00000473916 STAT5BP51692 787 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms