RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 DCNP07585 359 aaKnown RBP18.48■□□□□ 0.55
HPS4-210ENST00000473782 GLULP15104 373 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 SLC26A2P50443 739 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 ANTXR2P58335 489 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 POTEGQ6S5H5 508 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 CABP7Q86V35 215 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
HPS4-210ENST00000473782 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
HPS4-210ENST00000473782 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
HPS4-210ENST00000473782 MYL10Q9BUA6 226 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 LNPKQ9C0E8 428 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 TBC1D17Q9HA65 648 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 AGO4Q9HCK5 861 aaKnown RBP18.48■□□□□ 0.55
HPS4-210ENST00000473782 IGSF9Q9P2J2 1179 aa18.48■□□□□ 0.55
HPS4-210ENST00000473782 COL1A2P08123 1366 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 A0A0U1RQF3 1178 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 PLEKHA8P1O95397 391 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 SMARCA1P28370 1054 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 CA8P35219 290 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 ATXN1P54253 815 aaKnown RBP18.47■□□□□ 0.55
HPS4-210ENST00000473782 TBC1D8BQ0IIM8 1120 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 WTAPQ15007 396 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 LETM2Q2VYF4 491 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 DDX53Q86TM3 631 aaKnown RBP18.47■□□□□ 0.55
HPS4-210ENST00000473782 PLEKHM2Q8IWE5 1019 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 SLC44A3Q8N4M1 653 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 LINC01465Q8N7H1 131 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 SFXN1Q9H9B4 322 aa18.47■□□□□ 0.55
HPS4-210ENST00000473782 C2orf16Q68DN1 1984 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 CYP21A2P08686 494 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 CLCN4P51793 760 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 SPECC1Q5M775 1068 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 C1orf210Q8IVY1 113 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 ABI1Q8IZP0 508 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
HPS4-210ENST00000473782 TMEM169Q96HH4 297 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 IGSF21Q96ID5 467 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 HINFPQ9BQA5 517 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
HPS4-210ENST00000473782 CA14Q9ULX7 337 aa18.46■□□□□ 0.55
HPS4-210ENST00000473782 STK25O00506 426 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 LILRB3O75022 631 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 ALDH7A1P49419 539 aaKnown RBP18.45■□□□□ 0.54
HPS4-210ENST00000473782 POLGP54098 1239 aaPredicted RBP18.45■□□□□ 0.54
HPS4-210ENST00000473782 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
HPS4-210ENST00000473782 PTPN14Q15678 1187 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 PHLDB3Q6NSJ2 640 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 RNF169Q8NCN4 708 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 SDF4Q9BRK5 362 aa18.45■□□□□ 0.54
HPS4-210ENST00000473782 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 MEIS1O00470 390 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
HPS4-210ENST00000473782 B4GALT3O60512 393 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 CLCN3P51790 818 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 NLRP11P59045 1033 aaKnown RBP18.44■□□□□ 0.54
HPS4-210ENST00000473782 GIT2Q14161 759 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 ZC3H14Q6PJT7 736 aaKnown RBP18.44■□□□□ 0.54
HPS4-210ENST00000473782 C15orf39Q6ZRI6 1047 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 KLHL5Q96PQ7 755 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 MYADMQ96S97 322 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 EPS15L1Q9UBC2 864 aa18.44■□□□□ 0.54
HPS4-210ENST00000473782 SPDYE3A6NKU9 549 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 LRRN2O75325 713 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 GALTP07902 379 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 SRFP11831 508 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
HPS4-210ENST00000473782 FGFR4P22455 802 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 EIF4BP23588 611 aaKnown RBP18.43■□□□□ 0.54
HPS4-210ENST00000473782 CEP55Q53EZ4 464 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 SWSAP1Q6NVH7 229 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 PDXDC2PQ6P474 469 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 GPR152Q8TDT2 470 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 PGBD1Q96JS3 809 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 ZNF668Q96K58 619 aaPredicted RBP18.43■□□□□ 0.54
HPS4-210ENST00000473782 LY9Q9HBG7 655 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 ZNF302Q9NR11 478 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 SIT1Q9Y3P8 196 aa18.43■□□□□ 0.54
HPS4-210ENST00000473782 MEIS3P2A8K0S8 358 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 BACH1O14867 736 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 CNPP09543 421 aaKnown RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 TGM1P22735 817 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 TRDNQ13061 729 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 COL9A3Q14050 684 aaPredicted RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 BMS1Q14692 1282 aaKnown RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 PPFIBP1Q86W92 1011 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 ZNF654Q8IZM8 581 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 METTL13Q8N6R0 699 aa18.42■□□□□ 0.54
HPS4-210ENST00000473782 WDR6Q9NNW5 1121 aaKnown RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 SEC63Q9UGP8 760 aaKnown RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 MAFBQ9Y5Q3 323 aaPredicted RBP18.42■□□□□ 0.54
HPS4-210ENST00000473782 BAHCC1Q9P281 2608 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms