RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 GPR182O15218 404 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 STBD1O95210 358 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 CPA1P15085 419 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 SLC26A2P50443 739 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
MCF2L-223ENST00000473345 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
MCF2L-223ENST00000473345 ADCY7P51828 1080 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-223ENST00000473345 PKN1Q16512 942 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 RARS2Q5T160 578 aaKnown RBP10.93□□□□□ -0.66
MCF2L-223ENST00000473345 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 TMC7Q7Z402 723 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 METTL13Q8N6R0 699 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 SLC22A17Q8WUG5 538 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 LPPQ93052 612 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 SH2D3AQ9BRG2 576 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 ESYT1Q9BSJ8 1104 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 BARHL2Q9NY43 387 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 GABBR1Q9UBS5 961 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 SORCS3Q9UPU3 1222 aa10.93□□□□□ -0.66
MCF2L-223ENST00000473345 N4BP1O75113 896 aaKnown RBP10.92□□□□□ -0.66
MCF2L-223ENST00000473345 CYP3A4P08684 503 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 CALM1P0DP23 149 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 CALM2P0DP24 149 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 CALM3P0DP25 149 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 ADD1P35611 737 aaKnown RBP10.92□□□□□ -0.66
MCF2L-223ENST00000473345 NBL1P41271 181 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 GPC3P51654 580 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 BCAR1P56945 870 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 PDE12Q6L8Q7 609 aaKnown RBP10.92□□□□□ -0.66
MCF2L-223ENST00000473345 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 TMTC2Q8N394 836 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 BBXQ8WY36 941 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF558Q96NG5 402 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 PRRX2Q99811 253 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
MCF2L-223ENST00000473345 SPG21Q9NZD8 308 aa10.92□□□□□ -0.66
MCF2L-223ENST00000473345 DARSP14868 501 aaKnown RBP10.91□□□□□ -0.66
MCF2L-223ENST00000473345 HOXB8P17481 243 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-223ENST00000473345 EIF4BP23588 611 aaKnown RBP10.91□□□□□ -0.66
MCF2L-223ENST00000473345 TARBP2Q15633 366 aaKnown RBP10.91□□□□□ -0.66
MCF2L-223ENST00000473345 RTN1Q16799 776 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 FAM160B1Q5W0V3 765 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 PPP1R18Q6NYC8 613 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 MIS18BP1Q6P0N0 1132 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 ZBTB33Q86T24 672 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 LRRC43Q8N309 656 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 NRDE2Q9H7Z3 1164 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 DENND4AQ7Z401 1863 aa10.91□□□□□ -0.66
MCF2L-223ENST00000473345 COL4A3Q01955 1670 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 NARSO43776 548 aaKnown RBP10.9□□□□□ -0.66
MCF2L-223ENST00000473345 CXCL14O95715 111 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF76P36508 570 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 AP3B2Q13367 1082 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 MTMR3Q13615 1198 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 SMC1AQ14683 1233 aaKnown RBP10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-223ENST00000473345 KIAA1841Q6NSI8 718 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-223ENST00000473345 TMC5Q6UXY8 1006 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF280BQ86YH2 543 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ZDHHC14Q8IZN3 488 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 VPS52Q8N1B4 723 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 CASP10Q92851 521 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 ZNF577Q9BSK1 485 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 AKT3Q9Y243 479 aa10.9□□□□□ -0.66
MCF2L-223ENST00000473345 VPS13AQ96RL7 3174 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 MYO10Q9HD67 2058 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 KLF18A0A0U1RQI7 1052 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 GOLGA8BA8MQT2 603 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 MSH4O15457 936 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 ZBTB43O43298 467 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 LILRB3O75022 631 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 DDHD2O94830 711 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 EOMESO95936 686 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 GALTP07902 379 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 CIITAP33076 1130 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 SLC11A1P49279 550 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 PRKCEQ02156 737 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 ITIH3Q06033 890 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 PFKFB3Q16875 520 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-223ENST00000473345 PRR16Q569H4 304 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 KSR1Q8IVT5 923 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 UBALD2Q8IYN6 164 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 ST13P5Q8NFI4 369 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-223ENST00000473345 RSAD2Q8WXG1 361 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 ZMYND12Q9H0C1 365 aa10.89□□□□□ -0.67
MCF2L-223ENST00000473345 UNC45AQ9H3U1 944 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms