RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 REEP2Q9BRK0 252 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ZNF577Q9BSK1 485 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 TIPINQ9BVW5 301 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 LSM14BQ9BX40 385 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 IFIH1Q9BYX4 1025 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 MAF1Q9H063 256 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 TAOK3Q9H2K8 898 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ACBD3Q9H3P7 528 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 AS3MTQ9HBK9 375 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 MYOZ2Q9NPC6 264 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 PLCB1Q9NQ66 1216 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 FAM207AQ9NSI2 230 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 JRKLQ9Y4A0 524 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ATP8B3O60423 1300 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 SHTN1A0MZ66 631 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 GTPBP10A4D1E9 387 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 LRRC53A6NM62 1247 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MEIS1O00470 390 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 OPLAHO14841 1288 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 FANCGO15287 622 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 PJA2O43164 708 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 CTNND1O60716 968 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 ZBED4O75132 1171 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 GCNT3O95395 438 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 AFPP02771 609 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC172P0C7W6 258 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MAPTP10636 758 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 PRLRP16471 622 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TCP1P17987 556 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MAGEA1P43355 309 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 KLK7P49862 253 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 HSD17B4P51659 736 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 JAG1P78504 1218 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 AMPD2Q01433 879 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 GHRHRQ02643 423 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MYBPC2Q14324 1141 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 ASIC2Q16515 512 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 IFI16Q16666 785 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MAP9Q49MG5 647 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
CCDC171-205ENST00000472806 XRRA1Q6P2D8 792 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TRAPPC11Q7Z392 1133 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 VPS36Q86VN1 386 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 CAGE1Q8TC20 777 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 ARID3AQ99856 593 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MXRA8Q9BRK3 442 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 MKNK1Q9BUB5 465 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TMEM39BQ9GZU3 492 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 KIAA1683Q9H0B3 1180 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 PARVGQ9HBI0 331 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TBC1D22BQ9NU19 505 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 TBC1D7Q9P0N9 293 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 FBXL5Q9UKA1 691 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 PCDHA13Q9Y5I0 950 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 LOXHD1Q8IVV2 1947 aa8.37□□□□□ -1.07
CCDC171-205ENST00000472806 RPTORQ8N122 1335 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 NPHP3-ACAD11A0A0J9YXS1 232 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ARHGEF35A5YM69 484 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 WNT10BO00744 389 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 DKC1O60832 514 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 GFPT2O94808 682 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ZRANB2O95218 330 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 NR3C1P04150 777 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 KCNA3P22001 575 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 PSMC2P35998 433 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 EIF4A3P38919 411 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ZNF280AP59817 542 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 SNRPFP62306 86 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 CYP4A11Q02928 519 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ITIH3Q06033 890 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 CXCL9Q07325 125 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 AGERQ15109 404 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 CC2D1AQ6P1N0 951 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 C1orf186Q6ZWK4 172 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 MSL3Q8N5Y2 521 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 MYCT1Q8N699 235 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 GJA10Q969M2 543 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 EEF2KMTQ96G04 330 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 DYDC2Q96IM9 177 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC43Q96MW1 224 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 NOX5Q96PH1 765 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 IWS1Q96ST2 819 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 P2RX7Q99572 595 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms