RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 BARX1Q9HBU1 254 aaPredicted RBP7.78□□□□□ -1.16
CLK1-209ENST00000472679 KCMF1Q9P0J7 381 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 FBXO10Q9UK96 956 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 A0A0A6YYJ9 748 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 ALG1L2C9J202 215 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 K7ESF4 209 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 CUTAO60888 179 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 OPHN1O60890 802 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 HMGCRP04035 888 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 CELA3BP08861 270 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 GJA9P57773 515 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 PITRM1Q5JRX3 1037 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 TRIM68Q6AZZ1 485 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 SP8Q8IXZ3 490 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 STAG1Q8WVM7 1258 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 EAF2Q96CJ1 260 aaPredicted RBP7.77□□□□□ -1.17
CLK1-209ENST00000472679 HOMER2Q9NSB8 354 aa7.77□□□□□ -1.17
CLK1-209ENST00000472679 LPLP06858 475 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 RRADP55042 308 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 ITKQ08881 620 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 MAP3K12Q12852 859 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 FAPQ12884 760 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 TRIM25Q14258 630 aaKnown RBP7.76□□□□□ -1.17
CLK1-209ENST00000472679 DGKDQ16760 1214 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 BRDTQ58F21 947 aaPredicted RBP7.76□□□□□ -1.17
CLK1-209ENST00000472679 BMP8AQ7Z5Y6 402 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 REXO1L1PQ8IX06 675 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 ZDHHC14Q8IZN3 488 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 CBARPQ8N350 705 aaPredicted RBP7.76□□□□□ -1.17
CLK1-209ENST00000472679 MTMR8Q96EF0 704 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 NOL10Q9BSC4 688 aaKnown RBP7.76□□□□□ -1.17
CLK1-209ENST00000472679 CARD11Q9BXL7 1154 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 HAPLN2Q9GZV7 340 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 KIAA1683Q9H0B3 1180 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 KCNG1Q9UIX4 513 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 TRHDEQ9UKU6 1024 aa7.76□□□□□ -1.17
CLK1-209ENST00000472679 A0A0A6YYK5 440 aaPredicted RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 ST20-MTHFSA0A0A6YYL1 179 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 OTOL1A6NHN0 477 aaPredicted RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 B4GALT3O60512 393 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 H2AFYO75367 372 aaKnown RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 GPR3P46089 330 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 USP10Q14694 798 aaKnown RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 FSCN1Q16658 493 aaKnown RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 SLC41A1Q8IVJ1 513 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 KBTBD2Q8IY47 623 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 DYDC2Q96IM9 177 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 SOX7Q9BT81 388 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 XYLT2Q9H1B5 865 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 SAE1Q9UBE0 346 aaPredicted RBP7.75□□□□□ -1.17
CLK1-209ENST00000472679 USP18Q9UMW8 372 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 EDARQ9UNE0 448 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 NUMBLQ9Y6R0 609 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 DUSP10Q9Y6W6 482 aa7.75□□□□□ -1.17
CLK1-209ENST00000472679 ENPP1P22413 925 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
CLK1-209ENST00000472679 KIAA2012Q0VF49 1180 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 PCOLCEQ15113 449 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 UGT8Q16880 541 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 INAVAQ3KP66 663 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 SYDE2Q5VT97 1194 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 SPOCD1Q6ZMY3 1216 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 ACAP3Q96P50 834 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 ORAI2Q96SN7 254 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 KCTD10Q9H3F6 313 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 ZCCHC4Q9H5U6 513 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 USP40Q9NVE5 1235 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 DDX56Q9NY93 547 aaKnown RBP7.74□□□□□ -1.17
CLK1-209ENST00000472679 DNAI1Q9UI46 699 aa7.74□□□□□ -1.17
CLK1-209ENST00000472679 GABRDO14764 452 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 B4GALT4O60513 344 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 SASH1O94885 1247 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 MRE11P49959 708 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 KLF1Q13351 362 aaPredicted RBP7.73□□□□□ -1.17
CLK1-209ENST00000472679 TBR1Q16650 682 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 ZNF827Q17R98 1081 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 RALYLQ86SE5 291 aaKnown RBP7.73□□□□□ -1.17
CLK1-209ENST00000472679 RTKN2Q8IZC4 609 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 NKD2Q969F2 451 aaPredicted RBP7.73□□□□□ -1.17
CLK1-209ENST00000472679 MENTQ9BUN1 341 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 ASPSCR1Q9BZE9 553 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 WNT8AQ9H1J5 351 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 PARD6AQ9NPB6 346 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLK1-209ENST00000472679 PRSS50Q9UI38 385 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 PCDHB6Q9Y5E3 794 aa7.73□□□□□ -1.17
CLK1-209ENST00000472679 HNRNPLP14866 589 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLK1-209ENST00000472679 LGALS4P56470 323 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 PPARAQ07869 468 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLK1-209ENST00000472679 ABCB5Q2M3G0 1257 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 GAREM2Q75VX8 874 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 FERMT3Q86UX7 667 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 FAM124AQ86V42 546 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 CDYL2Q8N8U2 506 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 GAB3Q8WWW8 586 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 FDXACB1Q9BRP7 624 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms