RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 FAM228BP0C875 321 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 H2AFXP16104 143 aaPredicted RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 ZSCAN20P17040 1043 aaPredicted RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 CXCR5P32302 372 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 ZNF131P52739 623 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 KRT76Q01546 638 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 CNTN2Q02246 1040 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 SEPT14Q6ZU15 432 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 RSRC2Q7L4I2 434 aaKnown RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 HAUS6Q7Z4H7 955 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 EHBP1Q8NDI1 1231 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.32□□□□□ -1.562e-13■□□□□ 11.3
TM4SF1-202ENST00000472441 CEP170P1Q96L14 293 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 KIFC3Q9BVG8 833 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 TSGA10Q9BZW7 698 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 NUCKS1Q9H1E3 243 aaKnown RBP5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 GANQ9H2C0 597 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 ELP3Q9H9T3 547 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 SPON1Q9HCB6 807 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 CYP39A1Q9NYL5 469 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 SALL4Q9UJQ4 1053 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 PNMA2Q9UL42 364 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 PCDHA10Q9Y5I2 948 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 CSADQ9Y600 493 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 CAPN6Q9Y6Q1 641 aa5.32□□□□□ -1.56
TM4SF1-202ENST00000472441 MYH10P35580 1976 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SSU72P8A0A1W2PR75 194 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SLC16A3O15427 465 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 PLS3P13797 630 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 JAK3P52333 1124 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 FSTL1Q12841 308 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ARHGAP44Q17R89 818 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 WHAMMP3Q1A5X7 153 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 EEPD1Q7L9B9 569 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 NCAPG2Q86XI2 1143 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 C4orf19Q8IY42 314 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SAMD3Q8N6K7 520 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ZSWIM2Q8NEG5 633 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 RABGGTAQ92696 567 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 OTUD5Q96G74 571 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 HINFPQ9BQA5 517 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CBWD1Q9BRT8 395 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 MOV10L1Q9BXT6 1211 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ZNF446Q9NWS9 450 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 AJAP1Q9UKB5 411 aaPredicted RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 WDR87Q6ZQQ6 2873 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 NCK2O43639 380 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 RGS20O76081 388 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 GFPT2O94808 682 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 KRT13P13646 458 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SFNP31947 248 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 MATR3P43243 847 aaKnown RBP eCLIP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 FMO5P49326 533 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 DLG4P78352 724 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 AMPD2Q01433 879 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 GHRHRQ02643 423 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 PTK2Q05397 1052 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 TUBB2AQ13885 445 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 PTPROQ16827 1216 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 KIAA0753Q2KHM9 967 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ASTE1Q2TB18 679 aaPredicted RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CBWD6Q4V339 395 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CBWD3Q5JTY5 395 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CBWD5Q5RIA9 395 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 WDR78Q5VTH9 848 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ANO5Q75V66 913 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CYFIP1Q7L576 1253 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 TRAPPC11Q7Z392 1133 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 NOA1Q8NC60 698 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 TRIM58Q8NG06 486 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 RBM46Q8TBY0 533 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 CLMNQ96JQ2 1002 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 C12orf42Q96LP6 360 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ALS2CR12Q96Q35 445 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 MMS19Q96T76 1030 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 TUBB2BQ9BVA1 445 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 PACSIN1Q9BY11 444 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 RNF39Q9H2S5 420 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 PRDM10Q9NQV6 1147 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 ADARB2Q9NS39 739 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SLC9A2Q9UBY0 812 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SEPT9Q9UHD8 586 aaPredicted RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 DDX41Q9UJV9 622 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 SNCAIPQ9Y6H5 919 aa5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 COL11A1P12107 1806 aaPredicted RBP5.31□□□□□ -1.56
TM4SF1-202ENST00000472441 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 IRF6O14896 467 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 ZNF862O60290 1169 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 LRRN2O75325 713 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 NOP2P46087 812 aaKnown RBP5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 OAZ1P54368 228 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 SLC18A3Q16572 532 aa5.3□□□□□ -1.56
TM4SF1-202ENST00000472441 GNPTABQ3T906 1256 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms