RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 DNM3Q9UQ16 869 aa18.67■□□□□ 0.58
TSPO-205ENST00000472378 COL4A3BPQ9Y5P4 624 aa18.67■□□□□ 0.58
TSPO-205ENST00000472378 SIP14410 1827 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 VWA3AA6NCI4 1184 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 ENPP3O14638 875 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 DEFB103AP81534 67 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 RESTQ13127 1097 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
TSPO-205ENST00000472378 SF3A1Q15459 793 aaKnown RBP18.66■□□□□ 0.58
TSPO-205ENST00000472378 PPP2R2DQ66LE6 453 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 PIGOQ8TEQ8 1089 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 PRPF31Q8WWY3 499 aaKnown RBP18.66■□□□□ 0.58
TSPO-205ENST00000472378 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
TSPO-205ENST00000472378 ERVK-5Q9HDB9 667 aa18.66■□□□□ 0.58
TSPO-205ENST00000472378 NOC2LQ9Y3T9 749 aaKnown RBP18.66■□□□□ 0.58
TSPO-205ENST00000472378 MYO9BQ13459 2157 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 LONP1P36776 959 aaKnown RBP18.65■□□□□ 0.58
TSPO-205ENST00000472378 PBX2P40425 430 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 RABGGTBP53611 331 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 POU5F1BQ06416 359 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 NCBP1Q09161 790 aaKnown RBP18.65■□□□□ 0.58
TSPO-205ENST00000472378 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSPO-205ENST00000472378 SLC24A5Q71RS6 500 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 SRGAP1Q7Z6B7 1085 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 NLRP4Q96MN2 994 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 PPP1R16BQ96T49 567 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 YME1L1Q96TA2 773 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 CDHR5Q9HBB8 845 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 DACT1Q9NYF0 836 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 KIAA1024Q9UPX6 916 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 ARID2Q68CP9 1835 aa18.65■□□□□ 0.58
TSPO-205ENST00000472378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.64■□□□□ 0.57
TSPO-205ENST00000472378 ZBTB39O15060 712 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 UBA7P41226 1012 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 PHKA2P46019 1235 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 LAMTOR4Q0VGL1 99 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 TCTN1Q2MV58 587 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 PADI6Q6TGC4 694 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
TSPO-205ENST00000472378 TMEM40Q8WWA1 233 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 OSBPL7Q9BZF2 842 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 NKX2-4Q9H2Z4 354 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.57
TSPO-205ENST00000472378 MTMR10Q9NXD2 777 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
TSPO-205ENST00000472378 LRFN2Q9ULH4 789 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 TTC3P53804 2025 aa18.64■□□□□ 0.57
TSPO-205ENST00000472378 GBF1Q92538 1859 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 A0A087WZ62 844 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 USO1O60763 962 aaKnown RBP18.63■□□□□ 0.57
TSPO-205ENST00000472378 UPP2O95045 317 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 CA3P07451 260 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 SKIP12755 728 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 DRP2Q13474 957 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 ATL3Q6DD88 541 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 NPAS4Q8IUM7 802 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 ADAM2Q99965 735 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 FDXACB1Q9BRP7 624 aaPredicted RBP18.63■□□□□ 0.57
TSPO-205ENST00000472378 RGS18Q9NS28 235 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
TSPO-205ENST00000472378 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
TSPO-205ENST00000472378 MORC2Q9Y6X9 1032 aaPredicted RBP18.63■□□□□ 0.57
TSPO-205ENST00000472378 EYA4O95677 639 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 SRGAP2CP0DJJ0 459 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 ZSCAN22P10073 491 aaPredicted RBP18.62■□□□□ 0.57
TSPO-205ENST00000472378 CYP11B2P19099 503 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 TXLNAP40222 546 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 SARSP49591 514 aaKnown RBP18.62■□□□□ 0.57
TSPO-205ENST00000472378 HTRA4P83105 476 aaPredicted RBP18.62■□□□□ 0.57
TSPO-205ENST00000472378 IL17AQ16552 155 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 HYIQ5T013 277 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 FAM117BQ6P1L5 589 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 RNF149Q8NC42 400 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 RASSF8Q8NHQ8 419 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 RSPH1Q8WYR4 309 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 TIPINQ9BVW5 301 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 PCDHB7Q9Y5E2 793 aa18.62■□□□□ 0.57
TSPO-205ENST00000472378 HOXA2O43364 376 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 ARL2P36404 184 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
TSPO-205ENST00000472378 Q7L0L9 218 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 CATSPER4Q7RTX7 472 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 KIFAP3Q92845 792 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 IFT74Q96LB3 600 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 SAMD11Q96NU1 681 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 GAS2L1Q99501 681 aaPredicted RBP18.61■□□□□ 0.57
TSPO-205ENST00000472378 NFKBIZQ9BYH8 718 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 TTYH1Q9H313 450 aaPredicted RBP18.61■□□□□ 0.57
TSPO-205ENST00000472378 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
TSPO-205ENST00000472378 XPNPEP1Q9NQW7 623 aa18.61■□□□□ 0.57
TSPO-205ENST00000472378 BMP2KQ9NSY1 1161 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms