RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
SCAF4-205ENST00000472318 FADS2P1A8MWK0 482 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 NUAK1O60285 661 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 RTP1P59025 263 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 PRKCZQ05513 592 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
SCAF4-205ENST00000472318 C17orf99Q6UX52 265 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 NECAB2Q7Z6G3 386 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 USP38Q8NB14 1042 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 DHRS1Q96LJ7 313 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 PLCD4Q9BRC7 762 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 IFT57Q9NWB7 429 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 CPA4Q9UI42 421 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 PCDHGB7Q9Y5F8 929 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 PCDHAC2Q9Y5I4 1007 aa8.51□□□□□ -1.05
SCAF4-205ENST00000472318 DDX60Q8IY21 1712 aaKnown RBP8.51□□□□□ -1.05
SCAF4-205ENST00000472318 LAMB1P07942 1786 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 LAMB2P55268 1798 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 C9IYK1 514 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 BTBD19C9JJ37 291 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 U2SURPO15042 1029 aaKnown RBP8.5□□□□□ -1.05
SCAF4-205ENST00000472318 PNLIPP16233 465 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
SCAF4-205ENST00000472318 BMS1Q14692 1282 aaKnown RBP8.5□□□□□ -1.05
SCAF4-205ENST00000472318 NFE2L2Q16236 605 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 CRTC3Q6UUV7 619 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 PMM1Q92871 262 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 TM9SF2Q99805 663 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 FBXL21Q9UKT6 434 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 GPR55Q9Y2T6 319 aaPredicted RBP8.5□□□□□ -1.05
SCAF4-205ENST00000472318 COL1A1P02452 1464 aaPredicted RBP8.5□□□□□ -1.05
SCAF4-205ENST00000472318 AOX1Q06278 1338 aa8.5□□□□□ -1.05
SCAF4-205ENST00000472318 ANKRD36CQ5JPF3 1778 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 MEIS1O00470 390 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 STK10O94804 968 aaKnown RBP8.49□□□□□ -1.05
SCAF4-205ENST00000472318 ANXA1P04083 346 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 HOXD10P28358 340 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 GTF2A2P52657 109 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 PROSER3Q2NL68 480 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 PLEKHG6Q3KR16 790 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 HSF5Q4G112 596 aaPredicted RBP8.49□□□□□ -1.05
SCAF4-205ENST00000472318 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 MRFAP1L1Q96HT8 127 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 IRF2BPLQ9H1B7 796 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
SCAF4-205ENST00000472318 GABRQQ9UN88 632 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 INPP5FQ9Y2H2 1132 aa8.49□□□□□ -1.05
SCAF4-205ENST00000472318 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 CREB3O43889 395 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 DNAJC6O75061 913 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 FOSL2P15408 326 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 VAV1P15498 845 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 PMS1P54277 932 aaKnown RBP8.48□□□□□ -1.05
SCAF4-205ENST00000472318 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
SCAF4-205ENST00000472318 SUPT20HL1Q3ZLR7 823 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 GALNT18Q6P9A2 607 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
SCAF4-205ENST00000472318 FAM89AQ96GI7 184 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 SGPP1Q9BX95 441 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
SCAF4-205ENST00000472318 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 MRPL42Q9Y6G3 142 aaKnown RBP8.48□□□□□ -1.05
SCAF4-205ENST00000472318 TAF6LQ9Y6J9 622 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
SCAF4-205ENST00000472318 CLRN2A0PK11 232 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 FAM86C2PA6NEL3 165 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 S100BP04271 92 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-205ENST00000472318 GSNP06396 782 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 PRKAR2BP31323 418 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 EIF4A1P60842 406 aaKnown RBP8.47□□□□□ -1.05
SCAF4-205ENST00000472318 YBX1P67809 324 aaKnown RBP8.47□□□□□ -1.05
SCAF4-205ENST00000472318 VGLL4Q14135 290 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 TTLL10Q6ZVT0 673 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 CCDC144CPQ8IYA2 1237 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 SPC25Q9HBM1 224 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 GABBR1Q9UBS5 961 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 DDX41Q9UJV9 622 aaKnown RBP8.47□□□□□ -1.05
SCAF4-205ENST00000472318 FAM205AQ6ZU69 1335 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 MYO3BQ8WXR4 1341 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
SCAF4-205ENST00000472318 COL3A1P02461 1466 aaPredicted RBP8.46□□□□□ -1.05
SCAF4-205ENST00000472318 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.06
SCAF4-205ENST00000472318 ADCY3O60266 1144 aa8.46□□□□□ -1.06
SCAF4-205ENST00000472318 RACK1P63244 317 aaKnown RBP8.46□□□□□ -1.06
SCAF4-205ENST00000472318 HSP90AB3PQ58FF7 597 aa8.46□□□□□ -1.06
SCAF4-205ENST00000472318 RTP2Q5QGT7 225 aa8.46□□□□□ -1.06
SCAF4-205ENST00000472318 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.06
SCAF4-205ENST00000472318 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
SCAF4-205ENST00000472318 KRTAP4-9Q9BYQ8 210 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms