RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PADI3Q9ULW8 664 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
CALD1-215ENST00000472096 SMC3Q9UQE7 1217 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
CALD1-215ENST00000472096 FNDC1Q4ZHG4 1894 aaPredicted RBP16.88■□□□□ 0.29
CALD1-215ENST00000472096 IGKV6-21A0A0C4DH24 114 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 POTEMA6NI47 508 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 GPR32O75388 356 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 OR52Z1P0C646 297 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
CALD1-215ENST00000472096 FOSL2P15408 326 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
CALD1-215ENST00000472096 TAP1Q03518 808 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
CALD1-215ENST00000472096 ZNF174Q15697 407 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 TOP1MTQ969P6 601 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 RAD9AQ99638 391 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 EIF2AK1Q9BQI3 630 aaKnown RBP16.87■□□□□ 0.29
CALD1-215ENST00000472096 SUGCTQ9HAC7 445 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
CALD1-215ENST00000472096 NOC2LQ9Y3T9 749 aaKnown RBP16.87■□□□□ 0.29
CALD1-215ENST00000472096 EYSQ5T1H1 3165 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 DPYSL4O14531 572 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 MAFO75444 373 aaPredicted RBP16.86■□□□□ 0.29
CALD1-215ENST00000472096 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 YWHABP31946 246 aaKnown RBP16.86■□□□□ 0.29
CALD1-215ENST00000472096 CRYBB1P53674 252 aaPredicted RBP16.86■□□□□ 0.29
CALD1-215ENST00000472096 NLRP11P59045 1033 aaKnown RBP16.86■□□□□ 0.29
CALD1-215ENST00000472096 DRP2Q13474 957 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 CUL4AQ13619 759 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 FTHL17Q9BXU8 183 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 TMX1Q9H3N1 280 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 CYP26B1Q9NR63 512 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
CALD1-215ENST00000472096 ENPP3O14638 875 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 SLITRK3O94933 977 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 UPP2O95045 317 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 TOB1P50616 345 aaPredicted RBP16.85■□□□□ 0.29
CALD1-215ENST00000472096 GPC3P51654 580 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 NPEPPSP55786 919 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 SPRED2Q7Z698 418 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 FAM228AQ86W67 206 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 GAS2L1Q99501 681 aaPredicted RBP16.85■□□□□ 0.29
CALD1-215ENST00000472096 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 ADAMTS10Q9H324 1103 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
CALD1-215ENST00000472096 LINC01553A4QN01 128 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 H3BQV1 296 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 LYPLA2O95372 231 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 NFX1Q12986 1120 aaKnown RBP16.84■□□□□ 0.29
CALD1-215ENST00000472096 ODR4Q5SWX8 454 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 RTN4RL1Q86UN2 441 aaPredicted RBP16.84■□□□□ 0.29
CALD1-215ENST00000472096 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 C4orf32Q8N8J7 132 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 ZNF668Q96K58 619 aaPredicted RBP16.84■□□□□ 0.29
CALD1-215ENST00000472096 CEP170P1Q96L14 293 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
CALD1-215ENST00000472096 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 ST3GAL5Q9UNP4 418 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 PCDHB6Q9Y5E3 794 aa16.84■□□□□ 0.29
CALD1-215ENST00000472096 TRANK1O15050 2925 aa16.83■□□□□ 0.29
CALD1-215ENST00000472096 EPOPA6NHQ4 379 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 ZBTB39O15060 712 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 GPR182O15218 404 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 MGEA5O60502 916 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 RFC5P40937 340 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 TECP42680 631 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 DNM2P50570 870 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 POLGP54098 1239 aaPredicted RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 XKR9Q5GH70 373 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 PRRC2BQ5JSZ5 2229 aaKnown RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 FAM43BQ6ZT52 329 aaPredicted RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 MAFAQ8NHW3 353 aaPredicted RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 YME1L1Q96TA2 773 aa16.83■□□□□ 0.28
CALD1-215ENST00000472096 DHX33Q9H6R0 707 aaKnown RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 RC3H2Q9HBD1 1191 aaKnown RBP16.83■□□□□ 0.28
CALD1-215ENST00000472096 ADGRA3Q8IWK6 1321 aa16.82■□□□□ 0.28
CALD1-215ENST00000472096 EIF4BP23588 611 aaKnown RBP16.82■□□□□ 0.28
CALD1-215ENST00000472096 EMC2Q15006 297 aa16.82■□□□□ 0.28
CALD1-215ENST00000472096 LARP1BQ659C4 914 aaKnown RBP16.82■□□□□ 0.28
CALD1-215ENST00000472096 NLRP7Q8WX94 980 aa16.82■□□□□ 0.28
CALD1-215ENST00000472096 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
CALD1-215ENST00000472096 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.82■□□□□ 0.28
CALD1-215ENST00000472096 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
CALD1-215ENST00000472096 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
CALD1-215ENST00000472096 MED24O75448 989 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms