RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 DTNBO60941 627 aa25.35■■□□□ 1.65
C9orf3-213ENST00000471978 SSTR3P32745 418 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-213ENST00000471978 GJB4Q9NTQ9 266 aa25.35■■□□□ 1.65
C9orf3-213ENST00000471978 TYW1Q9NV66 732 aaKnown RBP25.35■■□□□ 1.65
C9orf3-213ENST00000471978 C5orf42Q9H799 3197 aa25.35■■□□□ 1.65
C9orf3-213ENST00000471978 FNDC1Q4ZHG4 1894 aaPredicted RBP25.34■■□□□ 1.65
C9orf3-213ENST00000471978 DDX11L8A8MPP1 907 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 STBD1O95210 358 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 DARSP14868 501 aaKnown RBP25.34■■□□□ 1.65
C9orf3-213ENST00000471978 IRS1P35568 1242 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 DLX2Q07687 328 aaPredicted RBP25.34■■□□□ 1.65
C9orf3-213ENST00000471978 ANKRD1Q15327 319 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 NEK8Q86SG6 692 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 NLRP7Q8WX94 980 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 SH2D3AQ9BRG2 576 aa25.34■■□□□ 1.65
C9orf3-213ENST00000471978 LINC01565O15544 149 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 CTDNEP1O95476 244 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 AK2P54819 239 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 DRP2Q13474 957 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 CLUL1Q15846 466 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 PPP4R3AQ6IN85 833 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 ADGRD2Q7Z7M1 963 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 OXER1Q8TDS5 423 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 CEP89Q96ST8 783 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 ORC3Q9UBD5 711 aaPredicted RBP25.33■■□□□ 1.65
C9orf3-213ENST00000471978 HCSTQ9UBK5 93 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 RAPGEFL1Q9UHV5 662 aa25.33■■□□□ 1.65
C9orf3-213ENST00000471978 HOXA2O43364 376 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 FGFR4P22455 802 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 DNM2P50570 870 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 PSMC5P62195 406 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 CDC42EP1Q00587 391 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 ADAM15Q13444 863 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 ERICH6BQ5W0A0 696 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 PIK3AP1Q6ZUJ8 805 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 COLGALT1Q8NBJ5 622 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 FAM20AQ96MK3 541 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 TMEM117Q9H0C3 514 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 CWH43Q9H720 699 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 KCNMB3Q9NPA1 279 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 VAV3Q9UKW4 847 aa25.32■■□□□ 1.64
C9orf3-213ENST00000471978 IGKV6-21A0A0C4DH24 114 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 PI4K2BG5E9Z4 385 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 EML1O00423 815 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 CCNT1O60563 726 aaKnown RBP25.31■■□□□ 1.64
C9orf3-213ENST00000471978 TBX10O75333 385 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 FGF18O76093 207 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 GCFC2P16383 781 aaKnown RBP25.31■■□□□ 1.64
C9orf3-213ENST00000471978 UBE3AQ05086 875 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 PPP2R5CQ13362 524 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 CSPP1Q1MSJ5 1256 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 ECHDC2Q86YB7 292 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 THNSL1Q8IYQ7 743 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 MICAL1Q8TDZ2 1067 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 WASF1Q92558 559 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 CASD1Q96PB1 797 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 GCOM2Q9BZD3 368 aaPredicted RBP25.31■■□□□ 1.64
C9orf3-213ENST00000471978 PRKAG3Q9UGI9 489 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 PCDHGC5Q9Y5F6 944 aa25.31■■□□□ 1.64
C9orf3-213ENST00000471978 PLXNA4Q9HCM2 1894 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 MAFO75444 373 aaPredicted RBP25.3■■□□□ 1.64
C9orf3-213ENST00000471978 CSDE1O75534 798 aaKnown RBP25.3■■□□□ 1.64
C9orf3-213ENST00000471978 LAG3P18627 525 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 NDUFV1P49821 464 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 TMEM31Q5JXX7 168 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 ANO5Q75V66 913 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 RBM23Q86U06 439 aaKnown RBP25.3■■□□□ 1.64
C9orf3-213ENST00000471978 ABI1Q8IZP0 508 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 EFHBQ8N7U6 833 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 NECAB1Q8N987 351 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 RNF169Q8NCN4 708 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 NAP1L4Q99733 375 aaKnown RBP25.3■■□□□ 1.64
C9orf3-213ENST00000471978 RNF19AQ9NV58 838 aa25.3■■□□□ 1.64
C9orf3-213ENST00000471978 SUCLA2Q9P2R7 463 aaPredicted RBP25.3■■□□□ 1.64
C9orf3-213ENST00000471978 QARSP47897 775 aaKnown RBP25.29■■□□□ 1.64
C9orf3-213ENST00000471978 NRIP1P48552 1158 aa25.29■■□□□ 1.64
C9orf3-213ENST00000471978 ZP2Q05996 745 aa25.29■■□□□ 1.64
C9orf3-213ENST00000471978 LRFN3Q9BTN0 628 aa25.29■■□□□ 1.64
C9orf3-213ENST00000471978 TLR9Q9NR96 1032 aa25.29■■□□□ 1.64
C9orf3-213ENST00000471978 CD207Q9UJ71 328 aa25.29■■□□□ 1.64
C9orf3-213ENST00000471978 A0A087WZ62 844 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 A0A0U1RQF3 1178 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 TBX3O15119 743 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 MBTPS2O43462 519 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 MARCH6O60337 910 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 SMAD4Q13485 552 aaKnown RBP25.28■■□□□ 1.64
C9orf3-213ENST00000471978 SMAD2Q15796 467 aaKnown RBP25.28■■□□□ 1.64
C9orf3-213ENST00000471978 ME3Q16798 604 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 EARS2Q5JPH6 523 aaKnown RBP25.28■■□□□ 1.64
C9orf3-213ENST00000471978 PLA2G4FQ68DD2 849 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 LRRC55Q6ZSA7 311 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 RHPN2Q8IUC4 686 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 ADHFE1Q8IWW8 467 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 HAS1Q92839 578 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 JPH2Q9BR39 696 aaPredicted RBP25.28■■□□□ 1.64
C9orf3-213ENST00000471978 FDXACB1Q9BRP7 624 aaPredicted RBP25.28■■□□□ 1.64
C9orf3-213ENST00000471978 TLE6Q9H808 572 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 DACT1Q9NYF0 836 aa25.28■■□□□ 1.64
C9orf3-213ENST00000471978 DKC1O60832 514 aaKnown RBP eCLIP25.27■■□□□ 1.642e-9■□□□□ 11.2
C9orf3-213ENST00000471978 GPR37L1O60883 481 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms