RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SPA17Q15506 151 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 PCNX4Q63HM2 1172 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 TMCO3Q6UWJ1 677 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 CACNA2D4Q7Z3S7 1137 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CTAGE6Q86UF2 777 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 TPH2Q8IWU9 490 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CTAGE4Q8IX94 777 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 DAW1Q8N136 415 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 KRT222Q8N1A0 295 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 NOA1Q8NC60 698 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SYTL5Q8TDW5 730 aaPredicted RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 TMEM174Q8WUU8 243 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 HNRNPLLQ8WVV9 542 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SECISBP2LQ93073 1101 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SLC35C1Q96A29 364 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 PNKPQ96T60 521 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 LXNQ9BS40 222 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 IFIH1Q9BYX4 1025 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 ZHX3Q9H4I2 956 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 PARVGQ9HBI0 331 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 METTL14Q9HCE5 456 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 AGO4Q9HCK5 861 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SIX2Q9NPC8 291 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 JADE2Q9NQC1 790 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 DMAC2Q9NW81 257 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 HDAC6Q9UBN7 1215 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ARMCX3Q9UH62 379 aaPredicted RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ZNF112Q9UJU3 913 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 FBXL5Q9UKA1 691 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ODF2LQ9ULJ1 636 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 PPP1R9AQ9ULJ8 1098 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 NENFQ9UMX5 172 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 SCAF8Q9UPN6 1271 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SAR1BQ9Y6B6 198 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CAPN6Q9Y6Q1 641 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ATP8B3O60423 1300 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 GTPBP10A4D1E9 387 aaKnown RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 USO1O60763 962 aaKnown RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 FAM13AO94988 1023 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 PRLRP16471 622 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 VCAM1P19320 739 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 RPL13P26373 211 aaKnown RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 PON1P27169 355 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 NMT1P30419 496 aaKnown RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 PRKCIP41743 596 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 MAGEA1P43355 309 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 GMPSP49915 693 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 JAM2P57087 298 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 SPP2Q13103 211 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 TKFCQ3LXA3 575 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 GLIPR1L2Q4G1C9 344 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 KLHDC7AQ5VTJ3 777 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 SFMBT2Q5VUG0 894 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 PAXIP1Q6ZW49 1069 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 ZNF720Q7Z2F6 126 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 IRF2BP2Q7Z5L9 587 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 PNMA8AQ86V59 439 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 MCF2L2Q86YR7 1114 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 TRIM58Q8NG06 486 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 OLIG1Q8TAK6 271 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 UBE2Q2Q8WVN8 375 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 ZFRQ96KR1 1074 aaKnown RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 MMS19Q96T76 1030 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 CRACR2AQ9BSW2 395 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 MKNK1Q9BUB5 465 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 FUT8Q9BYC5 575 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 IKZF4Q9H2S9 585 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 ZSWIM4Q9H7M6 989 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 MLXIPQ9HAP2 919 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 POLD4Q9HCU8 107 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 NLRC4Q9NPP4 1024 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 KCNH7Q9NS40 1196 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 AJAP1Q9UKB5 411 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 SNX12Q9UMY4 172 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 PAPPA2Q9BXP8 1791 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
SPEN-204ENST00000471538 SSC5DA1L4H1 1573 aa7.03□□□□□ -1.28
SPEN-204ENST00000471538 MACROD2A1Z1Q3 448 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 SFI1A8K8P3 1242 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 BTNL10A8MVZ5 291 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 PDE2AO00408 941 aaPredicted RBP7.02□□□□□ -1.29
SPEN-204ENST00000471538 NRG2O14511 850 aaPredicted RBP7.02□□□□□ -1.29
SPEN-204ENST00000471538 MAP2K7O14733 419 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 AKR1B10O60218 316 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 SRGAP2O75044 1071 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 TACC1O75410 805 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 MOCS3O95396 460 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 P4HBP07237 508 aaKnown RBP7.02□□□□□ -1.29
SPEN-204ENST00000471538 FDX1P10109 184 aa7.02□□□□□ -1.29
SPEN-204ENST00000471538 MAPTP10636 758 aaKnown RBP7.02□□□□□ -1.29
SPEN-204ENST00000471538 EPB41P11171 864 aaKnown RBP7.02□□□□□ -1.29
SPEN-204ENST00000471538 ACTN1P12814 892 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms