RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DSG1Q02413 1049 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 NOLC1Q14978 699 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC39-202ENST00000471307 PRKD1Q15139 912 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-202ENST00000471307 BMP8AQ7Z5Y6 402 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 JAZF1Q86VZ6 243 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 PLA2G12BQ9BX93 195 aa8.05□□□□□ -1.12
CCDC39-202ENST00000471307 SLC26A4O43511 780 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 ATP2A2P16615 1042 aaKnown RBP8.04□□□□□ -1.12
CCDC39-202ENST00000471307 LRRC32Q14392 662 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 PRAMEF9Q5VWM5 478 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 TIGD7Q6NT04 549 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-202ENST00000471307 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
CCDC39-202ENST00000471307 PASD1Q8IV76 773 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 C7orf31Q8N865 590 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-202ENST00000471307 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 HAPLN2Q9GZV7 340 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 DENND2AQ9ULE3 1009 aa8.04□□□□□ -1.12
CCDC39-202ENST00000471307 OCRLQ01968 901 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
CCDC39-202ENST00000471307 KANSL1Q7Z3B3 1105 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 OR14K1Q8NGZ2 314 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 RABGGTAQ92696 567 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 OR14A2Q96R54 314 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 TOMM22Q9NS69 142 aa8.03□□□□□ -1.12
CCDC39-202ENST00000471307 NACADO15069 1562 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 CD40P25942 277 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 ADAM15Q13444 863 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 GPR158Q5T848 1215 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 CNNM4Q6P4Q7 775 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 PALM2Q8IXS6 379 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 NKD2Q969F2 451 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-202ENST00000471307 SLC7A6OSQ96CW6 309 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-202ENST00000471307 ADOQ96SZ5 270 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 PITHD1Q9GZP4 211 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-202ENST00000471307 SLC6A15Q9H2J7 730 aa8.02□□□□□ -1.13
CCDC39-202ENST00000471307 USP36Q9P275 1121 aaKnown RBP8.02□□□□□ -1.13
CCDC39-202ENST00000471307 SCNN1BP51168 640 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 ADCY7P51828 1080 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 ADCY2Q08462 1091 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 C21orf62-AS1Q17RA5 79 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 TAF7LQ5H9L4 462 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 KIAA1841Q6NSI8 718 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 MAMDC4Q6UXC1 1216 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 ADGRE4PQ86SQ3 457 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 GPR135Q8IZ08 494 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 SHCBP1Q8NEM2 672 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 DYDC2Q96IM9 177 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 POLR3BQ9NW08 1133 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-202ENST00000471307 PLA2G3Q9NZ20 509 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 SYNPO2Q9UMS6 1093 aa8.01□□□□□ -1.13
CCDC39-202ENST00000471307 KPNA1P52294 538 aaPredicted RBP8□□□□□ -1.13
CCDC39-202ENST00000471307 SART3Q15020 963 aaKnown RBP8□□□□□ -1.13
CCDC39-202ENST00000471307 Q6ZSN1 163 aa8□□□□□ -1.13
CCDC39-202ENST00000471307 SPRED1Q7Z699 444 aa8□□□□□ -1.13
CCDC39-202ENST00000471307 DHX37Q8IY37 1157 aaKnown RBP8□□□□□ -1.13
CCDC39-202ENST00000471307 GCDHQ92947 438 aaPredicted RBP8□□□□□ -1.13
CCDC39-202ENST00000471307 WDR92Q96MX6 357 aa8□□□□□ -1.13
CCDC39-202ENST00000471307 TARS2Q9BW92 718 aaKnown RBP8□□□□□ -1.13
CCDC39-202ENST00000471307 ZMAT4Q9H898 229 aa8□□□□□ -1.13
CCDC39-202ENST00000471307 ZNF891A8MT65 544 aaPredicted RBP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 PRPF6O94906 941 aaKnown RBP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 ACO1P21399 889 aaKnown RBP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 ANTXR2P58335 489 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 SMAD3P84022 425 aaKnown RBP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 RIN1Q13671 783 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 GAGE13Q4V321 117 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 SPDYAQ5MJ70 313 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 NXPE1Q8N323 547 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 SMC1BQ8NDV3 1235 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 OR2W6PQ8NHA6 318 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 CHTF18Q8WVB6 975 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 MPHOSPH9Q99550 1183 aa7.99□□□□□ -1.13
CCDC39-202ENST00000471307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 H2AFY2Q9P0M6 372 aaPredicted RBP7.99□□□□□ -1.13
CCDC39-202ENST00000471307 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 PHC1P78364 1004 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 ZXDAP98168 799 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 HHEXQ03014 270 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 GRM7Q14831 915 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 PCBP1Q15365 356 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC39-202ENST00000471307 PLEKHG4Q58EX7 1191 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 RTF1Q92541 710 aaKnown RBP7.98□□□□□ -1.13
CCDC39-202ENST00000471307 MTG2Q9H4K7 406 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 THG1LQ9NWX6 298 aaKnown RBP7.98□□□□□ -1.13
CCDC39-202ENST00000471307 TBX22Q9Y458 520 aa7.98□□□□□ -1.13
CCDC39-202ENST00000471307 RB1CC1Q8TDY2 1594 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 C2orf78A6NCI8 922 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 MSX2P35548 267 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-202ENST00000471307 FOXL1Q12952 345 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 MAN2A1Q16706 1144 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 CRIP3Q6Q6R5 217 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 CLEC14AQ86T13 490 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 MYL10Q9BUA6 226 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 KRTAP4-5Q9BYR2 181 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 OSBPL6Q9BZF3 934 aa7.97□□□□□ -1.13
CCDC39-202ENST00000471307 POFUT1Q9H488 388 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms