RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 GBP3Q9H0R5 595 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 TMEM206Q9H813 350 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 EMSYQ7Z589 1322 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 NRDCO43847 1150 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 TARBP2Q15633 366 aaKnown RBP28.54■■■□□ 2.16
U2AF1-208ENST00000471250 HAUS6Q7Z4H7 955 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 TRIM59Q8IWR1 403 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 GOLGA5Q8TBA6 731 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 ACCSQ96QU6 501 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 ERGIC2Q96RQ1 377 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 NTPCRQ9BSD7 190 aaKnown RBP28.54■■■□□ 2.16
U2AF1-208ENST00000471250 TINF2Q9BSI4 451 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 DHX33Q9H6R0 707 aaKnown RBP28.54■■■□□ 2.16
U2AF1-208ENST00000471250 CLIC2O15247 247 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 SLC16A3O15427 465 aaKnown RBP28.53■■■□□ 2.16
U2AF1-208ENST00000471250 GYPCP04921 128 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 CLCN1P35523 988 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 SMTNP53814 917 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 ADKP55263 362 aaKnown RBP28.53■■■□□ 2.16
U2AF1-208ENST00000471250 ARHGAP1Q07960 439 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 MAP2K5Q13163 448 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 LAMC2Q13753 1193 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 HS2ST1Q7LGA3 356 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 FRMD5Q7Z6J6 570 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 PPME1Q9Y570 386 aa28.53■■■□□ 2.16
U2AF1-208ENST00000471250 SLC16A4O15374 487 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 GH1P01241 217 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 TPM1P09493 284 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 NPTX2P47972 431 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 POLGP54098 1239 aaPredicted RBP28.52■■■□□ 2.16
U2AF1-208ENST00000471250 DMP1Q13316 513 aaPredicted RBP28.52■■■□□ 2.16
U2AF1-208ENST00000471250 EMC2Q15006 297 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 BSNDQ8WZ55 320 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 IKZF4Q9H2S9 585 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 AGPAT3Q9NRZ7 376 aa28.52■■■□□ 2.16
U2AF1-208ENST00000471250 RFC5P40937 340 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 SOX10P56693 466 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 SYCP3Q8IZU3 236 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 BBXQ8WY36 941 aaPredicted RBP28.51■■■□□ 2.16
U2AF1-208ENST00000471250 GLG1Q92896 1179 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 HVCN1Q96D96 273 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 ABHD16BQ9H3Z7 469 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 DMAC2Q9NW81 257 aa28.51■■■□□ 2.16
U2AF1-208ENST00000471250 MFAP3LO75121 409 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 TMEM161BQ8NDZ6 487 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 CPLX3Q8WVH0 158 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 EMID1Q96A84 441 aaPredicted RBP28.51■■■□□ 2.15
U2AF1-208ENST00000471250 PANX2Q96RD6 677 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 POLR3FQ9H1D9 316 aaPredicted RBP28.51■■■□□ 2.15
U2AF1-208ENST00000471250 KMT5AQ9NQR1 393 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 FAM184BQ9ULE4 1060 aa28.51■■■□□ 2.15
U2AF1-208ENST00000471250 CCDC169A6NNP5 214 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 AKAP3O75969 853 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 HOXC6P09630 235 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 CASP14P31944 242 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 ADCYAP1R1P41586 468 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 SLC26A2P50443 739 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 MYBPC2Q14324 1141 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 NOLC1Q14978 699 aaKnown RBP eCLIP28.5■■■□□ 2.15
U2AF1-208ENST00000471250 SYCP1Q15431 976 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 TMEM139Q8IV31 216 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 CNGA4Q8IV77 575 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 SLC9A9Q8IVB4 645 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 C17orf53Q8N3J3 647 aaPredicted RBP28.5■■■□□ 2.15
U2AF1-208ENST00000471250 USP6NLQ92738 828 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 SMARCAD1Q9H4L7 1026 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 METTL14Q9HCE5 456 aaKnown RBP28.5■■■□□ 2.15
U2AF1-208ENST00000471250 CGNQ9P2M7 1197 aaKnown RBP28.5■■■□□ 2.15
U2AF1-208ENST00000471250 KCNG1Q9UIX4 513 aa28.5■■■□□ 2.15
U2AF1-208ENST00000471250 TOMM70O94826 608 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 FXR1P51114 621 aaKnown RBP eCLIP28.49■■■□□ 2.15
U2AF1-208ENST00000471250 CRHR2Q13324 411 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 ACVR2BQ13705 512 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 ATP8B4Q8TF62 1192 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 TMEM174Q8WUU8 243 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 CCDC51Q96ER9 411 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 IFT74Q96LB3 600 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 ZIC5Q96T25 663 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 NUP58Q9BVL2 599 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 SPTLC3Q9NUV7 552 aa28.49■■■□□ 2.15
U2AF1-208ENST00000471250 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.49■■■□□ 2.15
U2AF1-208ENST00000471250 EPB41P11171 864 aaKnown RBP28.48■■■□□ 2.15
U2AF1-208ENST00000471250 SNRPFP62306 86 aaKnown RBP28.48■■■□□ 2.15
U2AF1-208ENST00000471250 TRIM50Q86XT4 487 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 SLC7A3Q8WY07 619 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 MKNK1Q9BUB5 465 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 ARMCX3Q9UH62 379 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-208ENST00000471250 DOCK3Q8IZD9 2030 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 KCNJ6P48051 423 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 CASP4P49662 377 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 PPP2R3AQ06190 1150 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 PLCB4Q15147 1175 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 GJC2Q5T442 439 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-208ENST00000471250 IQSEC1Q6DN90 963 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 C12orf56Q8IXR9 622 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 RETREG2Q8NC44 543 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 PPTC7Q8NI37 304 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 TBX20Q9UMR3 447 aa28.48■■■□□ 2.15
U2AF1-208ENST00000471250 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-208ENST00000471250 RASSF10A6NK89 507 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms