RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 CDKAL1Q5VV42 579 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 GPBP1Q86WP2 473 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 EXOC8Q8IYI6 725 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 SLC43A3Q8NBI5 491 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 TMEM174Q8WUU8 243 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 ERCC4Q92889 916 aaPredicted RBP10.13□□□□□ -0.79
PTPRE-207ENST00000471218 TRIM5Q9C035 493 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 BLZF1Q9H2G9 400 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 THAP9Q9H5L6 903 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 C17orf75Q9HAS0 396 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 NFE2L3Q9Y4A8 694 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 PCDHA11Q9Y5I1 949 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 LOXHD1Q8IVV2 1947 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 PLXNA1Q9UIW2 1896 aa10.13□□□□□ -0.79
PTPRE-207ENST00000471218 KPNA6O60684 536 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 TBCAO75347 108 aaKnown RBP10.12□□□□□ -0.79
PTPRE-207ENST00000471218 RGS20O76081 388 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 ATG7O95352 703 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 COL9A1P20849 921 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 RFC2P35250 354 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 SLC26A2P50443 739 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 GSDMDP57764 484 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 ECM1Q16610 540 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 NFIL3Q16649 462 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 BMT2Q1RMZ1 405 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 CENPPQ6IPU0 288 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 MIS18BP1Q6P0N0 1132 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 METTL7BQ6UX53 244 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 C16orf59Q7L2K0 433 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 OTUD6AQ7L8S5 288 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 KCNK18Q7Z418 384 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 TLK2Q86UE8 772 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 GOLGA5Q8TBA6 731 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 PHOSPHO2Q8TCD6 241 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 P2RX5Q93086 422 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 DYDC2Q96IM9 177 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 UHRF1Q96T88 793 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-207ENST00000471218 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 HSD3B7Q9H2F3 369 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 PRDM12Q9H4Q4 367 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 VTA1Q9NP79 307 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 PANK4Q9NVE7 773 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-207ENST00000471218 CGNQ9P2M7 1197 aaKnown RBP10.12□□□□□ -0.79
PTPRE-207ENST00000471218 SLC9A2Q9UBY0 812 aa10.12□□□□□ -0.79
PTPRE-207ENST00000471218 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-207ENST00000471218 IGSF9BQ9UPX0 1349 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 DYNC1LI2O43237 492 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 GNA14O95837 355 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 KRT18P05783 430 aaKnown RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 PRCPP42785 496 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 CPT1AP50416 773 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 SNRPFP62306 86 aaKnown RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 COASYQ13057 564 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 MYBPC2Q14324 1141 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 HSP90AA2PQ14568 343 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 EDRF1Q3B7T1 1238 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 TTI2Q6NXR4 508 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 C1orf186Q6ZWK4 172 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 MYOCDQ8IZQ8 938 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 SCFD2Q8WU76 684 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 NELFBQ8WX92 580 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 PPM1EQ8WY54 764 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 EMID1Q96A84 441 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 FAM167AQ96KS9 214 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 DRC1Q96MC2 740 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 TSG101Q99816 390 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 ST6GALNAC4Q9H4F1 302 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 PARVGQ9HBI0 331 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 COG5Q9UP83 839 aa10.11□□□□□ -0.79
PTPRE-207ENST00000471218 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
PTPRE-207ENST00000471218 ASTN1O14525 1302 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 PHLPP2Q6ZVD8 1323 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 IGKV6D-21A0A0A0MT36 114 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 RBM47A0AV96 593 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 MYADML2A6NDP7 307 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 E9PMD0 336 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 H0YCG3 227 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 NKRFO15226 690 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 GAS2O43903 313 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CCNE2O96020 404 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 TPM2P07951 284 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 ACRP10323 421 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 IDEP14735 1019 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CD44P16070 742 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 POU3F3P20264 500 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CYP2C18P33260 490 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 FANCCQ00597 558 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CNTN2Q02246 1040 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CYP4A11Q02928 519 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms