RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 KDM3AQ9Y4C1 1321 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 SMIM35A0A1B0GVV1 85 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 CARNS1A5YM72 827 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 SPDYE3A6NKU9 549 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 FGF18O76093 207 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 INSRRP14616 1297 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 LAG3P18627 525 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 DNAJB1P25685 340 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 PPM1AP35813 382 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 IGBP1P78318 339 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 ITIH3Q06033 890 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 TROAPQ12815 778 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 DUSP6Q16828 381 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 MARCH8Q5T0T0 291 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 MCTP2Q6DN12 878 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 PLPPR4Q7Z2D5 763 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 ADGRD2Q7Z7M1 963 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 TMTC2Q8N394 836 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 NCOA7Q8NI08 942 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 RUFY2Q8WXA3 655 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 ASIC4Q96FT7 647 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 PSTPIP2Q9H939 334 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 TMEM260Q9NX78 707 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 SORCS3Q9UPU3 1222 aa10.11□□□□□ -0.79
XRN1-208ENST00000470537 GSTTP1A0A1W2PQM5 241 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 H0Y858 1186 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 PER2O15055 1255 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 CYTH3O43739 400 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 RPS6KA5O75582 802 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 GLP2RO95838 553 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 KCNA2P16389 499 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 CLCN1P35523 988 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 TECP42680 631 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 STAT5BP51692 787 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 USP17L6PQ6QN14 398 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 RTN4RL1Q86UN2 441 aaPredicted RBP10.1□□□□□ -0.79
XRN1-208ENST00000470537 RETREG3Q86VR2 466 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 CASP10Q92851 521 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 MFSD1Q9H3U5 465 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 ELAC1Q9H777 363 aaKnown RBP10.1□□□□□ -0.79
XRN1-208ENST00000470537 ATP6V0A4Q9HBG4 840 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 JPH1Q9HDC5 661 aaPredicted RBP10.1□□□□□ -0.79
XRN1-208ENST00000470537 SLC9A2Q9UBY0 812 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 CACNA1HO95180 2353 aa10.1□□□□□ -0.79
XRN1-208ENST00000470537 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 MEIS2O14770 477 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 ATP9AO75110 1047 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 CLCN5P51795 746 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 VCPP55072 806 aaKnown RBP10.09□□□□□ -0.79
XRN1-208ENST00000470537 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 ANKRD54Q6NXT1 300 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 TMC7Q7Z402 723 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 ABI1Q8IZP0 508 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 MRPS27Q92552 414 aaKnown RBP10.09□□□□□ -0.79
XRN1-208ENST00000470537 NKD2Q969F2 451 aaPredicted RBP10.09□□□□□ -0.79
XRN1-208ENST00000470537 MTA3Q9BTC8 594 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 JADE2Q9NQC1 790 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 ENTPD7Q9NQZ7 604 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 RGS18Q9NS28 235 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
XRN1-208ENST00000470537 FAM86C1Q9NVL1 165 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 TMEM161AQ9NX61 479 aa10.09□□□□□ -0.79
XRN1-208ENST00000470537 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
XRN1-208ENST00000470537 BAZ2BQ9UIF8 2168 aaKnown RBP10.08□□□□□ -0.8
XRN1-208ENST00000470537 LAMA4Q16363 1823 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 HBP1O60381 514 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 CALM1P0DP23 149 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 CALM2P0DP24 149 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 CALM3P0DP25 149 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 ITGB5P18084 799 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 NBL1P41271 181 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 MTHFRP42898 656 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 TMEM62Q0P6H9 643 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 FAM160B1Q5W0V3 765 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 CYB5R4Q7L1T6 521 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 KRI1Q8N9T8 703 aaKnown RBP10.08□□□□□ -0.8
XRN1-208ENST00000470537 KREMEN2Q8NCW0 462 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 PIBF1Q8WXW3 757 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 RSPH1Q8WYR4 309 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 ADAM2Q99965 735 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 TCF25Q9BQ70 676 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 S1PR5Q9H228 398 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 TYW1Q9NV66 732 aaKnown RBP10.08□□□□□ -0.8
XRN1-208ENST00000470537 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 WASF2Q9Y6W5 498 aa10.08□□□□□ -0.8
XRN1-208ENST00000470537 NFASCO94856 1347 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 DDAH1O94760 285 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 FOSP01100 380 aaPredicted RBP10.07□□□□□ -0.8
XRN1-208ENST00000470537 ZSCAN20P17040 1043 aaPredicted RBP10.07□□□□□ -0.8
XRN1-208ENST00000470537 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms