RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 NPTX2P47972 431 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 KCNJ6P48051 423 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 SMTNP53814 917 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 E4F1Q66K89 784 aaPredicted RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 FRMD5Q7Z6J6 570 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 ZNF467Q7Z7K2 595 aaPredicted RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 AFAP1L1Q8TED9 768 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 CCDC51Q96ER9 411 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 ACCSQ96QU6 501 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 KIFC3Q9BVG8 833 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 TMEM206Q9H813 350 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 ABHD10Q9NUJ1 306 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 TRMT1Q9NXH9 659 aaKnown RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 DOCK3Q8IZD9 2030 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 SLC16A3O15427 465 aaKnown RBP19.91■□□□□ 0.78
SMC4-211ENST00000469858 GTF2BQ00403 316 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 EMC2Q15006 297 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 NFIL3Q16649 462 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 DNTTIP2Q5QJE6 756 aaKnown RBP19.91■□□□□ 0.78
SMC4-211ENST00000469858 TRIM50Q86XT4 487 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 CCDC155Q8N6L0 562 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 GOLGA5Q8TBA6 731 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 GLG1Q92896 1179 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 NUP58Q9BVL2 599 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 POLR3FQ9H1D9 316 aaPredicted RBP19.91■□□□□ 0.78
SMC4-211ENST00000469858 ST6GALNAC4Q9H4F1 302 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 GPBP1L1Q9HC44 474 aaPredicted RBP19.91■□□□□ 0.78
SMC4-211ENST00000469858 VTA1Q9NP79 307 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 KMT5AQ9NQR1 393 aa19.91■□□□□ 0.78
SMC4-211ENST00000469858 DIS3Q9Y2L1 958 aaKnown RBP19.91■□□□□ 0.78
SMC4-211ENST00000469858 ZNF236Q9UL36 1845 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 RASSF10A6NK89 507 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 MARK3P27448 753 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 CYP2J2P51589 502 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 TAPT1Q6NXT6 567 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 CCAR2Q8N163 923 aaKnown RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 SLC17A8Q8NDX2 589 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 MAML3Q96JK9 1138 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 TTYH3Q9C0H2 523 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 C17orf75Q9HAS0 396 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 ZCCHC17Q9NP64 241 aaKnown RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 NRBP2Q9NSY0 501 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 FAM184BQ9ULE4 1060 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 CAPN11Q9UMQ6 739 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 SIK3Q9Y2K2 1263 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 LUC7L2Q9Y383 392 aaKnown RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 TLL2Q9Y6L7 1015 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 IFNL1Q8IU54 200 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 RETREG2Q8NC44 543 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 MMRN2Q9H8L6 949 aa19.9■□□□□ 0.78
SMC4-211ENST00000469858 ABT1Q9ULW3 272 aaKnown RBP19.9■□□□□ 0.78
SMC4-211ENST00000469858 XRCC5P13010 732 aaKnown RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 DCAF17Q5H9S7 520 aaPredicted RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 TMEM161BQ8NDZ6 487 aa19.89■□□□□ 0.77
SMC4-211ENST00000469858 SLC7A3Q8WY07 619 aa19.89■□□□□ 0.77
SMC4-211ENST00000469858 C16orf45Q96MC5 204 aaPredicted RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 NAA15Q9BXJ9 866 aaKnown RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 DHX33Q9H6R0 707 aaKnown RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 METTL14Q9HCE5 456 aaKnown RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 FAM207AQ9NSI2 230 aaPredicted RBP19.89■□□□□ 0.77
SMC4-211ENST00000469858 SLC15A5A6NIM6 579 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 SOWAHDA6NJG2 315 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 TISP43B9A030 160 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 LGR5O75473 907 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 OFD1O75665 1012 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 SNAI1O95863 264 aaPredicted RBP19.88■□□□□ 0.77
SMC4-211ENST00000469858 PSMC2P35998 433 aaKnown RBP19.88■□□□□ 0.77
SMC4-211ENST00000469858 KCNH2Q12809 1159 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 MAMDC4Q6UXC1 1216 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
SMC4-211ENST00000469858 FAM186BQ8IYM0 893 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 NPLOC4Q8TAT6 608 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 SPIRE2Q8WWL2 714 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 TMEM143Q96AN5 459 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 IFT74Q96LB3 600 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 AGPAT5Q9NUQ2 364 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 DENND3A2RUS2 1198 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 FAM155AB1AL88 458 aaPredicted RBP19.88■□□□□ 0.77
SMC4-211ENST00000469858 ADCYAP1R1P41586 468 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 RTP1P59025 263 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 FIGNQ5HY92 759 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 TCERG1LQ5VWI1 586 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 FAM167AQ96KS9 214 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 CEP89Q96ST8 783 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 KATNBL1Q9H079 304 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 KCND1Q9NSA2 647 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 DMAC2Q9NW81 257 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 TBX20Q9UMR3 447 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 FRMD4BQ9Y2L6 1034 aa19.88■□□□□ 0.77
SMC4-211ENST00000469858 EMSYQ7Z589 1322 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 ADGRA3Q8IWK6 1321 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 INHBEP58166 350 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 ARHGAP1Q07960 439 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 KCNMA1Q12791 1236 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 MTF1Q14872 753 aa19.87■□□□□ 0.77
SMC4-211ENST00000469858 TARBP2Q15633 366 aaKnown RBP19.87■□□□□ 0.77
SMC4-211ENST00000469858 OR8K1Q8NGG5 319 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms