RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 LCMT1Q9UIC8 334 aa16.91■□□□□ 0.3
BRAT1-204ENST00000469750 GPC5P78333 572 aa16.91■□□□□ 0.3
BRAT1-204ENST00000469750 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
BRAT1-204ENST00000469750 HVCN1Q96D96 273 aa16.91■□□□□ 0.3
BRAT1-204ENST00000469750 MID2Q9UJV3 735 aa16.91■□□□□ 0.3
BRAT1-204ENST00000469750 HUS1O60921 280 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 PALMO75781 387 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 RFC1P35251 1148 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 GPC3P51654 580 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 NNTQ13423 1086 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 TMEM270Q6UE05 265 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 CSPG5O95196 566 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 CALB1P05937 261 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 SERPINB6P35237 376 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 SEMA3FQ13275 785 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 CALR3Q96L12 384 aaKnown RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 HAUS8Q9BT25 410 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 PODXLO00592 558 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 STAT3P40763 770 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 VAMP7P51809 220 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 FNDC3AQ9Y2H6 1198 aaKnown RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 TTC4O95801 387 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 COPB2P35606 906 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-204ENST00000469750 IFT88Q13099 833 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 TFDP2Q14188 446 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 CRAMP1Q96RY5 1269 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 SLC8A2Q9UPR5 921 aa16.9■□□□□ 0.3
BRAT1-204ENST00000469750 ZRANB2O95218 330 aaKnown RBP eCLIP16.89■□□□□ 0.291e-5■■■■□ 25.7
BRAT1-204ENST00000469750 TBXAS1P24557 533 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 SPOPLQ6IQ16 392 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 EMBQ6PCB8 327 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 MMP19Q99542 508 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 POLD4Q9HCU8 107 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 SESN3P58005 492 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 DEPDC1BQ8WUY9 529 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 GBP5Q96PP8 586 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 NOVA2Q9UNW9 492 aaKnown RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 TTC36A6NLP5 189 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 PP2D1A8MPX8 630 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 RWDD4Q6NW29 188 aaKnown RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 ASNSD1Q9NWL6 643 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 ARID5BQ14865 1188 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 ELMSAN1Q6PJG2 1045 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 POLR3FQ9H1D9 316 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-204ENST00000469750 INPP5FQ9Y2H2 1132 aa16.89■□□□□ 0.29
BRAT1-204ENST00000469750 FCER1AP12319 257 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 IQANK1A0A1B0GTG1 560 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 TOM1L1O75674 476 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 GLE1Q53GS7 698 aaKnown RBP16.88■□□□□ 0.29
BRAT1-204ENST00000469750 LDHDQ86WU2 507 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 MRPL4Q9BYD3 311 aaKnown RBP16.88■□□□□ 0.29
BRAT1-204ENST00000469750 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 JCADQ9P266 1359 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 CASP8Q14790 479 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 EPHA7Q15375 998 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 C6orf118Q5T5N4 469 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 C11orf70Q9BRQ4 267 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 NFU1Q9UMS0 254 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 UBE4BO95155 1302 aa16.88■□□□□ 0.29
BRAT1-204ENST00000469750 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 TTI1O43156 1089 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 ADCY2Q08462 1091 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 KRT39Q6A163 491 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 GBP7Q8N8V2 638 aaPredicted RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 LUC7L3O95232 432 aaKnown RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 PLS3P13797 630 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 PMLP29590 882 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 PEX19P40855 299 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 CLCN6P51797 869 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 ZNF34Q8IZ26 560 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms