RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ARHGAP36Q6ZRI8 547 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 THNSL2Q86YJ6 484 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 SH3RF2Q8TEC5 729 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 MFSD3Q96ES6 412 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 TRIM8Q9BZR9 551 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 CAAP1Q9H8G2 361 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 CATSPERZQ9NTU4 200 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 GALNT8Q9NY28 637 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 SRPK3Q9UPE1 567 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 ATP23Q9Y6H3 246 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 TCRBV5S4A2TA0A5A2 114 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 SHTN1A0MZ66 631 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 FAM90A27PA6NNH2 459 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
SCFD1-205ENST00000469043 ACRV1P26436 265 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 HIBADHP31937 336 aaKnown RBP5.85□□□□□ -1.47
SCFD1-205ENST00000469043 KCNQ1P51787 676 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 INHBEP58166 350 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 DGCR2P98153 550 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 HHEXQ03014 270 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 MCL1Q07820 350 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 HLTFQ14527 1009 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCFD1-205ENST00000469043 USP30Q70CQ3 517 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 FBXW5Q969U6 566 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 NAP1L4Q99733 375 aaKnown RBP5.85□□□□□ -1.47
SCFD1-205ENST00000469043 ARPC5LQ9BPX5 153 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 PLA2G12BQ9BX93 195 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 INCENPQ9NQS7 918 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
SCFD1-205ENST00000469043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-205ENST00000469043 RASGRP1O95267 797 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 PTGS1P23219 599 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 SOX5P35711 763 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 ST5P78524 1137 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 SSRP1Q08945 709 aaKnown RBP5.84□□□□□ -1.47
SCFD1-205ENST00000469043 IGFL4Q6B9Z1 124 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 SPATC1Q76KD6 591 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 MTDHQ86UE4 582 aaKnown RBP5.84□□□□□ -1.47
SCFD1-205ENST00000469043 NIM1KQ8IY84 436 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 MYO1HQ8N1T3 1032 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 NINJ1Q92982 152 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 NELFAQ9H3P2 528 aa5.84□□□□□ -1.47
SCFD1-205ENST00000469043 AURKAIP1Q9NWT8 199 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-205ENST00000469043 ASXL2Q76L83 1435 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 GSTA4O15217 222 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 FOSP01100 380 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 C1SP09871 688 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 NAT1P18440 290 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 MEOX1P50221 254 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 GUCY2FP51841 1108 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 INHBCP55103 352 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 EIF4HQ15056 248 aaKnown RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 FIGNQ5HY92 759 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 YOD1Q5VVQ6 348 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 OTOP2Q7RTS6 562 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 MAMDC2Q7Z304 686 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 SCUBE1Q8IWY4 988 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 CHPFQ8IZ52 775 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 UBR7Q8N806 425 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 ZSWIM2Q8NEG5 633 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 ATL2Q8NHH9 583 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 IL17DQ8TAD2 202 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 NEU4Q8WWR8 484 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 IPO9Q96P70 1041 aaKnown RBP5.83□□□□□ -1.48
SCFD1-205ENST00000469043 SENP7Q9BQF6 1050 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 IKZF4Q9H2S9 585 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 TRAF6Q9Y4K3 522 aa5.83□□□□□ -1.48
SCFD1-205ENST00000469043 A0A087X0B3 334 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 MATN2O00339 956 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 WNT9AO14904 365 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 ADCY8P40145 1251 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 RAB27AP51159 221 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 IL13RA1P78552 427 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 FOXL1Q12952 345 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 CRY1Q16526 586 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 TBR1Q16650 682 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 WDR78Q5VTH9 848 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 KSR2Q6VAB6 950 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 KRBA2Q6ZNG9 492 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 C16orf59Q7L2K0 433 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 SGMS1Q86VZ5 419 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 OSTM1Q86WC4 334 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 PTRH1Q86Y79 214 aaKnown RBP5.82□□□□□ -1.48
SCFD1-205ENST00000469043 RTKN2Q8IZC4 609 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 ZNF808Q8N4W9 903 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-205ENST00000469043 GPATCH11Q8N954 259 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 TTC8Q8TAM2 541 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 PTPRN2Q92932 1015 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 CDC6Q99741 560 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 BTBD2Q9BX70 525 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 ZNF700Q9H0M5 742 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 PLA2G3Q9NZ20 509 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 ZIM2Q9NZV7 527 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 CDC42EP3Q9UKI2 254 aa5.82□□□□□ -1.48
SCFD1-205ENST00000469043 SETD1BQ9UPS6 1966 aaKnown RBP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 A0A087X1B8 175 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms