RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
LSM5-209ENST00000468872 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
LSM5-209ENST00000468872 SEC61A2Q9H9S3 476 aa6.92□□□□□ -1.3
LSM5-209ENST00000468872 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
LSM5-209ENST00000468872 PTPN22Q9Y2R2 807 aa6.92□□□□□ -1.3
LSM5-209ENST00000468872 TSC22D4Q9Y3Q8 395 aa6.92□□□□□ -1.3
LSM5-209ENST00000468872 ULK1O75385 1050 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 ALDH1L1O75891 902 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 ZNF888P0CJ79 500 aaPredicted RBP6.91□□□□□ -1.3
LSM5-209ENST00000468872 AOAHP28039 575 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 ZNF585AQ6P3V2 769 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 SMAD5Q99717 465 aaKnown RBP6.91□□□□□ -1.3
LSM5-209ENST00000468872 CARD11Q9BXL7 1154 aa6.91□□□□□ -1.3
LSM5-209ENST00000468872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.9□□□□□ -1.3
LSM5-209ENST00000468872 PRAMEF25A6NGN4 478 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 GABRDO14764 452 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 CUTAO60888 179 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 HIP1RO75146 1068 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 PTGS1P23219 599 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 KIF11P52732 1056 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 HERVK_113P62684 666 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
LSM5-209ENST00000468872 TOP3AQ13472 1001 aaPredicted RBP6.9□□□□□ -1.3
LSM5-209ENST00000468872 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
LSM5-209ENST00000468872 TERF2Q15554 542 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 ZNF174Q15697 407 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 DDB1Q16531 1140 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 BROXQ5VW32 411 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 GNRHR2Q96P88 292 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 LMF1Q96S06 567 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.3
LSM5-209ENST00000468872 DEF6Q9H4E7 631 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 INCENPQ9NQS7 918 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 TOMM22Q9NS69 142 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
LSM5-209ENST00000468872 K7ESF4 209 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 PTX3P26022 381 aaPredicted RBP6.89□□□□□ -1.31
LSM5-209ENST00000468872 MC4RP32245 332 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 SESN3P58005 492 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 ERVK-21P61565 698 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 IL13RA1P78552 427 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 SYDE2Q5VT97 1194 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 ESRP1Q6NXG1 681 aaKnown RBP6.89□□□□□ -1.31
LSM5-209ENST00000468872 SPRED1Q7Z699 444 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 SH3RF3Q8TEJ3 882 aaPredicted RBP6.89□□□□□ -1.31
LSM5-209ENST00000468872 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 LRRC37BQ96QE4 947 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 PCIF1Q9H4Z3 704 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
LSM5-209ENST00000468872 ZNF623O75123 536 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 SELENOPP49908 381 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 NEK2P51955 445 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 PHC1P78364 1004 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 ZXDAP98168 799 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 MCL1Q07820 350 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 WDR72Q3MJ13 1102 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 ZNF568Q3ZCX4 644 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 CC2D1AQ6P1N0 951 aaPredicted RBP6.88□□□□□ -1.31
LSM5-209ENST00000468872 CBARPQ8N350 705 aaPredicted RBP6.88□□□□□ -1.31
LSM5-209ENST00000468872 Q8TCH9 128 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 NEIL1Q96FI4 390 aaPredicted RBP6.88□□□□□ -1.31
LSM5-209ENST00000468872 MENTQ9BUN1 341 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 TCAF1Q9Y4C2 921 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 EID1Q9Y6B2 187 aa6.88□□□□□ -1.31
LSM5-209ENST00000468872 TNKSO95271 1327 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 FOXS1O43638 330 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 LSP1P33241 339 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 ETV4P43268 484 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 R3HDM1Q15032 1099 aaKnown RBP6.87□□□□□ -1.31
LSM5-209ENST00000468872 STILQ15468 1287 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 GPR158Q5T848 1215 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 TCTN3Q6NUS6 607 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 CXXC5Q7LFL8 322 aaKnown RBP6.87□□□□□ -1.31
LSM5-209ENST00000468872 PALM2Q8IXS6 379 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 AHCYL2Q96HN2 611 aaKnown RBP6.87□□□□□ -1.31
LSM5-209ENST00000468872 CHPF2Q9P2E5 772 aa6.87□□□□□ -1.31
LSM5-209ENST00000468872 MPIG6BO95866 241 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 CYP17A1P05093 508 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 SDHAP31040 664 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 ADCY8P40145 1251 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 EPHB1P54762 984 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 RRADP55042 308 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 FAPQ12884 760 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 RNF151Q2KHN1 245 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 INAVAQ3KP66 663 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 TAX1BP1Q86VP1 789 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 RASSF3Q86WH2 238 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 ZNF610Q8N9Z0 462 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms