RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 GJB5O95377 273 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 DEFB103AP81534 67 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 DRP2Q13474 957 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 RHPN2Q8IUC4 686 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 DEFB123Q8N688 67 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 RAD9AQ99638 391 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 ST3GAL5Q9UNP4 418 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 MORC2Q9Y6X9 1032 aaPredicted RBP16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 SZT2Q5T011 3432 aa16.47■□□□□ 0.23
TMEM39A-205ENST00000468676 TTC3P53804 2025 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 GBF1Q92538 1859 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 ARHGEF35A5YM69 484 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 ZSCAN22P10073 491 aaPredicted RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 PBX2P40425 430 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 RABGGTBP53611 331 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 MYOCDQ8IZQ8 938 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 TMEM40Q8WWA1 233 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 TOP1MTQ969P6 601 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 NT5C3AQ9H0P0 336 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 SLC28A3Q9HAS3 691 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 DDX19AQ9NUU7 478 aaKnown RBP16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 INSL6Q9Y581 213 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 CLIC4Q9Y696 253 aa16.46■□□□□ 0.23
TMEM39A-205ENST00000468676 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 A0A087WZ62 844 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 DENND3A2RUS2 1198 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 POU5F1BQ06416 359 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 TFDP1Q14186 410 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 HYIQ5T013 277 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 FAM228AQ86W67 206 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 CDK5RAP3Q96JB5 506 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 NLRP4Q96MN2 994 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 FDXACB1Q9BRP7 624 aaPredicted RBP16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
TMEM39A-205ENST00000468676 A0A087WWV3 80 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 EYA4O95677 639 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 CYP11B2P19099 503 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 CDC25AP30304 524 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 UBA7P41226 1012 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 PTPAQ15257 358 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 ECM1Q16610 540 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 FAM173BQ6P4H8 233 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 PADI6Q6TGC4 694 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 NKX2-4Q9H2Z4 354 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 ZNF576Q9H609 170 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 RGS18Q9NS28 235 aa16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
TMEM39A-205ENST00000468676 F13A1P00488 732 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 ZSCAN20P17040 1043 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 ARL2P36404 184 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 PHKA2P46019 1235 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 HTRA4P83105 476 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 PPP2R2DQ66LE6 453 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 SLC24A5Q71RS6 500 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 RTN4RL1Q86UN2 441 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 CABP7Q86V35 215 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 NPAS4Q8IUM7 802 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 KSR1Q8IVT5 923 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 ZNF668Q96K58 619 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 ADAM2Q99965 735 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 IFT122Q9HBG6 1241 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
TMEM39A-205ENST00000468676 CHD9Q3L8U1 2897 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 UPP2O95045 317 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 CA3P07451 260 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms