RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 GIMAP6Q6P9H5 292 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 TMED8Q6PL24 325 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 STOX1Q6ZVD7 989 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 RALYLQ86SE5 291 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 PPFIBP1Q86W92 1011 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 CERS3Q8IU89 383 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 TBC1D10CQ8IV04 446 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF444Q8N0Y2 327 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 NCOA7Q8NI08 942 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 HNRNPLLQ8WVV9 542 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 UBXN4Q92575 508 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 DHX38Q92620 1227 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 GPRC5DQ9NZD1 345 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 ARPP21Q9UBL0 812 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 HACL1Q9UJ83 578 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 PLAGL2Q9UPG8 496 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 SNX11Q9Y5W9 270 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 ARFGEF1Q9Y6D6 1849 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 RPAP1Q9BWH6 1393 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 MYH2Q9UKX2 1941 aa4.78□□□□□ -1.64
TMEM39A-204ENST00000468545 DOCK2Q92608 1830 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 TMEM265A0A087WTH1 108 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 GLTPD2A6NH11 291 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 DDTLA6NHG4 134 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 KIAA1324LA8MWY0 1029 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 C9IYK1 514 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 MPHOSPH10O00566 681 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 IFIT3O14879 490 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 PRC1O43663 620 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 RPS6KB1P23443 525 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 MCM5P33992 734 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 EPHX2P34913 555 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 SLC7A5Q01650 507 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 TFAP4Q01664 338 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 STK3Q13188 491 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 PRKG1Q13976 671 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 BECN1Q14457 450 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 RASA3Q14644 834 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 FXNQ16595 210 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 SBK1Q52WX2 424 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 ANGEL2Q5VTE6 544 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 TDRD10Q5VZ19 366 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 LARP1BQ659C4 914 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 DLK2Q6UY11 383 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 NFXL1Q6ZNB6 911 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 Q6ZUG5 572 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 RUFY3Q7L099 469 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 CYB5R4Q7L1T6 521 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 MIGA2Q7L4E1 593 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 RAB11FIP4Q86YS3 637 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 HSCBQ8IWL3 235 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 CCDC144CPQ8IYA2 1237 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 SLC44A5Q8NCS7 719 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 FAM151AQ8WW52 585 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 MISP3Q96FF7 219 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 IDI2Q9BXS1 227 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 KRT23Q9C075 422 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 TMEM39BQ9GZU3 492 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 RNF41Q9H4P4 317 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 ADARB2Q9NS39 739 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 ST14Q9Y5Y6 855 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 MYH7P12883 1935 aa4.77□□□□□ -1.65
TMEM39A-204ENST00000468545 NEDD4P46934 1319 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ERICH2A1L162 156 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TSPY2A6NKD2 308 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 DTNBO60941 627 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 LRRN2O75325 713 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ENTPD3O75355 529 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 PRNPP04156 253 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 HSP90AA1P07900 732 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 HMGB1P09429 215 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TSPY3P0CV98 308 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TSPY8P0CW00 308 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 SPINK2P20155 84 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 SSTR4P31391 388 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 MMP14P50281 582 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 AK2P54819 239 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 RBL2Q08999 1139 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 AUHQ13825 339 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 RAB33AQ14088 237 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 NCAPHQ15003 741 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 GNPTABQ3T906 1256 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TMEM67Q5HYA8 995 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 CDKAL1Q5VV42 579 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 VHLLQ6RSH7 139 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 THAP5Q7Z6K1 395 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 DTX1Q86Y01 620 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 FOXP4Q8IVH2 680 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 MB21D2Q8IYB1 491 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 NECAB1Q8N987 351 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 STAG1Q8WVM7 1258 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 KLHL6Q8WZ60 621 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ESR2Q92731 530 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 BRF1Q92994 677 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 DCPSQ96C86 337 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms