RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 CDY2AQ9Y6F7 541 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
COL4A6-205ENST00000468338 COL6A3P12111 3177 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 MAGEB2O15479 319 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 CHMP2AO43633 222 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 KCNJ6P48051 423 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 MCM2P49736 904 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 PRKCEQ02156 737 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL4A6-205ENST00000468338 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 TOP1MTQ969P6 601 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
COL4A6-205ENST00000468338 CELF4Q9BZC1 486 aaKnown RBP12.54□□□□□ -0.4
COL4A6-205ENST00000468338 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-205ENST00000468338 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 TRPV2Q9Y5S1 764 aa12.54□□□□□ -0.4
COL4A6-205ENST00000468338 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 KIF28PB7ZC32 967 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 GHRP10912 638 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-205ENST00000468338 EPHA7Q15375 998 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL4A6-205ENST00000468338 XKR3Q5GH77 459 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 TSHZ1Q6ZSZ6 1077 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 GLMNQ92990 594 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 RAD9AQ99638 391 aa12.53□□□□□ -0.4
COL4A6-205ENST00000468338 CHD7Q9P2D1 2997 aa12.52□□□□□ -0.4
COL4A6-205ENST00000468338 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.41
COL4A6-205ENST00000468338 CA3P07451 260 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL4A6-205ENST00000468338 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.41
COL4A6-205ENST00000468338 PSMC5P62195 406 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 TAP1Q03518 808 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 PDE4CQ08493 712 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 SWT1Q5T5J6 900 aaKnown RBP12.52□□□□□ -0.41
COL4A6-205ENST00000468338 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
COL4A6-205ENST00000468338 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
COL4A6-205ENST00000468338 LCHNA4D1U4 455 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 M0QZ92 97 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 ENPP3O14638 875 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TLL1O43897 1013 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 NEMFO60524 1076 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 GPR32O75388 356 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
COL4A6-205ENST00000468338 AMHP03971 560 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TMEM62Q0P6H9 643 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-205ENST00000468338 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 ANO5Q75V66 913 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
COL4A6-205ENST00000468338 RTN4RL1Q86UN2 441 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-205ENST00000468338 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 C4orf19Q8IY42 314 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 HSD17B14Q9BPX1 270 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 FTHL17Q9BXU8 183 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-205ENST00000468338 PADI3Q9ULW8 664 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 PCDHA12Q9UN75 941 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 INSL6Q9Y581 213 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
COL4A6-205ENST00000468338 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 SLITRK3O94933 977 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 LYPLA2O95372 231 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 CD52P31358 61 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 CLCN3P51790 818 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 CRYBB1P53674 252 aaPredicted RBP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 CALCRLQ16602 461 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 METTL13Q8N6R0 699 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 PRDM12Q9H4Q4 367 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 TTC12Q9H892 705 aaPredicted RBP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 RC3H2Q9HBD1 1191 aaKnown RBP12.5□□□□□ -0.41
COL4A6-205ENST00000468338 ERVK-5Q9HDB9 667 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 RGL1Q9NZL6 768 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
COL4A6-205ENST00000468338 MARCH6O60337 910 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 MAFO75444 373 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms