RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 CMTR2Q8IYT2 770 aaKnown RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 LINC01599Q8WXQ3 324 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 CEP89Q96ST8 783 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 EIF2AK1Q9BQI3 630 aaKnown RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 C17orf80Q9BSJ5 609 aa16.34■□□□□ 0.21
COMMD3-206ENST00000468179 SUCLA2Q9P2R7 463 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-206ENST00000468179 SLITRK3O94933 977 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 LYPLA2O95372 231 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 SKIV2LQ15477 1246 aaKnown RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 ERMNQ8TAM6 284 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 GDPD5Q8WTR4 605 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 C11orf84Q9BUA3 381 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-206ENST00000468179 COL4A6Q14031 1691 aa16.33■□□□□ 0.2
COMMD3-206ENST00000468179 TMEM150BA6NC51 233 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 H3BNC9 293 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 ASAP2O43150 1006 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 HOXA2O43364 376 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 LPXNO60711 386 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
COMMD3-206ENST00000468179 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
COMMD3-206ENST00000468179 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.22e-8■■■□□ 15.6
COMMD3-206ENST00000468179 BMPR1AP36894 532 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 GPM6BQ13491 265 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 CTTNQ14247 550 aaKnown RBP16.32■□□□□ 0.2
COMMD3-206ENST00000468179 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 XKR9Q5GH70 373 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 PLA2G4FQ68DD2 849 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 RHPN2Q8IUC4 686 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 PSPC1Q8WXF1 523 aaKnown RBP16.32■□□□□ 0.2
COMMD3-206ENST00000468179 CLP1Q92989 425 aaKnown RBP16.32■□□□□ 0.2
COMMD3-206ENST00000468179 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 PLVAPQ9BX97 442 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 CHST12Q9NRB3 414 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 ANKEF1Q9NU02 776 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 TMEM161AQ9NX61 479 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 DACT1Q9NYF0 836 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 COG5Q9UP83 839 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
COMMD3-206ENST00000468179 C9IYK1 514 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 C5orf67F2Z3F1 127 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 DLL1O00548 723 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 OR52Z1P0C646 297 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 CTNNB1P35222 781 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 NPEPPSP55786 919 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 FAM189BP81408 668 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
COMMD3-206ENST00000468179 ZNF174Q15697 407 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
COMMD3-206ENST00000468179 LMAN2LQ9H0V9 348 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 DHX33Q9H6R0 707 aaKnown RBP16.31■□□□□ 0.2
COMMD3-206ENST00000468179 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
COMMD3-206ENST00000468179 PTPRSQ13332 1948 aa16.31■□□□□ 0.2
COMMD3-206ENST00000468179 LAMA2P24043 3122 aaKnown RBP16.3■□□□□ 0.2
COMMD3-206ENST00000468179 H3BQV1 296 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 MGEA5O60502 916 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 SKIP12755 728 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 DRP2Q13474 957 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 DSC3Q14574 896 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 NLRP4Q96MN2 994 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 MTRQ99707 1265 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 AAASQ9NRG9 546 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-206ENST00000468179 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
COMMD3-206ENST00000468179 A0A087WZ62 844 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 LAD1O00515 517 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 DGAT1O75907 488 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-206ENST00000468179 TECP42680 631 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-206ENST00000468179 EMC2Q15006 297 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 P2RX5Q93086 422 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms