RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 KMT5BQ4FZB7 885 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 ZNF484Q5JVG2 852 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 UNC13DQ70J99 1090 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 DAW1Q8N136 415 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 LMBR1Q8WVP7 490 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 GSDMAQ96QA5 445 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 ZHX3Q9H4I2 956 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 HDAC6Q9UBN7 1215 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 ODF2LQ9ULJ1 636 aa7.6□□□□□ -1.19
SCAF4-204ENST00000467731 COL1A2P08123 1366 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
SCAF4-204ENST00000467731 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 FRMD3A2A2Y4 597 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 DNM1LO00429 736 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 SGPL1O95470 568 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 GJB1P08034 283 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 DRP2Q13474 957 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 HIC1Q14526 733 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 MARCH8Q5T0T0 291 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 FAM102BQ5T8I3 360 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 LRRC71Q8N4P6 559 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 METTL13Q8N6R0 699 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 C7orf31Q8N865 590 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 MCPH1Q8NEM0 835 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 VTI1AQ96AJ9 217 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 GLT1D1Q96MS3 346 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 TSEN34Q9BSV6 310 aaKnown RBP7.59□□□□□ -1.19
SCAF4-204ENST00000467731 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 PANK4Q9NVE7 773 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 PPME1Q9Y570 386 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 GRIN2DO15399 1336 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 IGKV6-21A0A0C4DH24 114 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 TBCAO75347 108 aaKnown RBP7.59□□□□□ -1.19
SCAF4-204ENST00000467731 CABYRO75952 493 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 FAM13AO94988 1023 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 C22orf31O95567 290 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 BMP6P22004 513 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 KLRC1P26715 233 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 RFC5P40937 340 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 COASYQ13057 564 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 FAM47CQ5HY64 1035 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 HPS3Q969F9 1004 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 CRISPLD2Q9H0B8 497 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 PARVGQ9HBI0 331 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 EXOC1Q9NV70 894 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 CGNQ9P2M7 1197 aaKnown RBP7.59□□□□□ -1.19
SCAF4-204ENST00000467731 GTF2IRD1Q9UHL9 959 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 MAN1B1Q9UKM7 699 aa7.59□□□□□ -1.19
SCAF4-204ENST00000467731 LAMA2P24043 3122 aaKnown RBP7.59□□□□□ -1.19
SCAF4-204ENST00000467731 PVALEFA0A1B0GWK0 134 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 C17orf102A2RUQ5 167 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 RRN3P2A6NIE6 340 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 TREHO43280 583 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 OFD1O75665 1012 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 RHOBTB3O94955 611 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 HOXC8P31273 242 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF131P52739 623 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 ADAM17P78536 824 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF200P98182 395 aaPredicted RBP7.59□□□□□ -1.2
SCAF4-204ENST00000467731 EHHADHQ08426 723 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 ITGA7Q13683 1181 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 KCNB1Q14721 858 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 HERC4Q5GLZ8 1057 aaPredicted RBP7.59□□□□□ -1.2
SCAF4-204ENST00000467731 EFCAB12Q6NXP0 572 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 NFRKBQ6P4R8 1299 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 MTHFD1LQ6UB35 978 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 SASS6Q6UVJ0 657 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.59□□□□□ -1.2
SCAF4-204ENST00000467731 CCDC65Q8IXS2 484 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 DRC1Q96MC2 740 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 TIPINQ9BVW5 301 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 PRDM16Q9HAZ2 1276 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 STARD7Q9NQZ5 370 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 TBC1D7Q9P0N9 293 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 COL4A3BPQ9Y5P4 624 aa7.59□□□□□ -1.2
SCAF4-204ENST00000467731 MAGEB2O15479 319 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 TFRCP02786 760 aaKnown RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 GJA8P48165 433 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 CLCN3P51790 818 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 STK4Q13043 487 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 MKRN4PQ13434 485 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 MORC3Q14149 939 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 ODR4Q5SWX8 454 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 SFR1Q86XK3 245 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 EXOC8Q8IYI6 725 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 SMYD4Q8IYR2 804 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 MYCT1Q8N699 235 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 KIFAP3Q92845 792 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 JPH2Q9BR39 696 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 POLR3FQ9H1D9 316 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 RMND1Q9NWS8 449 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 LARSQ9P2J5 1176 aaKnown RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 PHF24Q9UPV7 400 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 MBLAC1A4D2B0 266 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 GAS2O43903 313 aaKnown RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 MNX1P50219 401 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 TYRO3Q06418 890 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 DPCR1Q3MIW9 517 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms