RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 HLTFQ14527 1009 aaKnown RBP eCLIP6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 NOLC1Q14978 699 aaKnown RBP eCLIP6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 ACAP2Q15057 778 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 MUM1Q2TAK8 710 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 CMTR2Q8IYT2 770 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 SIGLEC10Q96LC7 697 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 QRSL1Q9H0R6 528 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 KCTD10Q9H3F6 313 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PRSS50Q9UI38 385 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 TMPRSS11EQ9UL52 423 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA9Q9Y5G4 932 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA8Q9Y5G5 932 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA7Q9Y5G6 932 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA6Q9Y5G7 932 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA3Q9Y5H0 932 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 PCDHGA2Q9Y5H1 932 aa6.65□□□□□ -1.34
GAPVD1-211ENST00000467707 TAL1P17542 331 aaPredicted RBP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 CYP2C19P33261 490 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 ADKP55263 362 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 DGKDQ16760 1214 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 MBNL2Q5VZF2 373 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 GRAMD4Q6IC98 578 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 LRSAM1Q6UWE0 723 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 UNQ6494/PRO21346Q6UXR6 183 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 KCNN1Q92952 543 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 HSPBAP1Q96EW2 488 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 TEKT5Q96M29 485 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 AIFM3Q96NN9 605 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 CSRNP2Q9H175 543 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 GCM1Q9NP62 436 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
GAPVD1-211ENST00000467707 PCDH8O95206 1070 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 IL18BPO95998 194 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 PF4V1P10720 104 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 XPAP23025 273 aaPredicted RBP6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 AKAP5P24588 427 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 GLRBP48167 497 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 EPHB3P54753 998 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 LGALS4P56470 323 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 NRG3P56975 720 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 CAP1Q01518 475 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 LRRC41Q15345 812 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 LYSMD2Q8IV50 215 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 SLC41A1Q8IVJ1 513 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 WDR75Q8IWA0 830 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 MAGEB6Q8N7X4 407 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 OR5AN1Q8NGI8 311 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 GAB3Q8WWW8 586 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 JADE3Q92613 823 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 ZBTB8AQ96BR9 441 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 NOL10Q9BSC4 688 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 TACO1Q9BSH4 297 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 HAPLN2Q9GZV7 340 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 IFT122Q9HBG6 1241 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 EDARQ9UNE0 448 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 CDY2AQ9Y6F7 541 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 PMF1-BGLAPU3KQ54 211 aa6.63□□□□□ -1.35
GAPVD1-211ENST00000467707 H0Y858 1186 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 IL33O95760 270 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 KNG1P01042 644 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 LPLP06858 475 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 SLC16A1P53985 500 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 HTRA3P83110 453 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 PPARAQ07869 468 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 ODF1Q14990 250 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 MAN2A1Q16706 1144 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 MIER2Q8N344 545 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 FATE1Q969F0 183 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 SGPP1Q9BX95 441 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 DPP7Q9UHL4 492 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 ZBTB21Q9ULJ3 1066 aa6.62□□□□□ -1.35
GAPVD1-211ENST00000467707 A0A0G2JNJ9 132 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 PRC1O43663 620 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 ATF3P18847 181 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 CD83Q01151 205 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 TRIM25Q14258 630 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 MLC1Q15049 377 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 GFOD2Q3B7J2 385 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 MINDY4Q4G0A6 757 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 CCSAPQ6IQ19 270 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 FAM180AQ6UWF9 173 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 IFNL2Q8IZJ0 200 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 ZSWIM3Q96MP5 696 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 ACE2Q9BYF1 805 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 POLR3BQ9NW08 1133 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 SAE1Q9UBE0 346 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 Q9UFV3 132 aa6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 SAP30BPQ9UHR5 308 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-211ENST00000467707 NDUFS2O75306 463 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms