RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 RPS6KA5O75582 802 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 YEATS4O95619 227 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 DARSP14868 501 aaKnown RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 EIF4BP23588 611 aaKnown RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 CD52P31358 61 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ARL2P36404 184 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 FOXD4L6Q3SYB3 417 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ODR4Q5SWX8 454 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 FOXD4L3Q6VB84 417 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 RTN4RL1Q86UN2 441 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 CABP7Q86V35 215 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ZNF410Q86VK4 478 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 RHPN2Q8IUC4 686 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 KSR1Q8IVT5 923 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 PSPC1Q8WXF1 523 aaKnown RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ZNF668Q96K58 619 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 CLIC6Q96NY7 704 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 OSMRQ99650 979 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 MTRQ99707 1265 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 GCOM2Q9BZD3 368 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-206ENST00000467681 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 NT5C3AQ9H0P0 336 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 BHMT2Q9H2M3 363 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 RCOR1Q9UKL0 485 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 ST3GAL5Q9UNP4 418 aa15.15■□□□□ 0.02
SSBP1-206ENST00000467681 GRXCR1A8MXD5 290 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 E9PMD0 336 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 SOX1O00570 391 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 GPR182O15218 404 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 PPP6R2O75170 966 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 ATP2A2P16615 1042 aaKnown RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 DDIT3P35638 169 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 KCNJ6P48051 423 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 WDR5P61964 334 aaKnown RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 SMAD3P84022 425 aaKnown RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 DNM1Q05193 864 aaKnown RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 NFX1Q12986 1120 aaKnown RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 PAK2Q13177 524 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 TMEM119Q4V9L6 283 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 FAM109BQ6ICB4 259 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 USP49Q70CQ1 688 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 KCNK18Q7Z418 384 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 CALML4Q96GE6 196 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 EPSTI1Q96J88 318 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 PLIN2Q99541 437 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 BMP2KQ9NSY1 1161 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-206ENST00000467681 COL4A3BPQ9Y5P4 624 aa15.14■□□□□ 0.01
SSBP1-206ENST00000467681 A0A087WZ62 844 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 SRGAP2CP0DJJ0 459 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 NUCB2P80303 420 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 POU5F1BQ06416 359 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 SPECC1Q5M775 1068 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.012e-8■■■■■ 47
SSBP1-206ENST00000467681 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 CDK5RAP3Q96JB5 506 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 SLC9A7Q96T83 725 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 FDXACB1Q9BRP7 624 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 INO80BQ9C086 356 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 TMX1Q9H3N1 280 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 IFT122Q9HBG6 1241 aa15.13■□□□□ 0.01
SSBP1-206ENST00000467681 RANBP2P49792 3224 aaKnown RBP15.13■□□□□ 0.01
SSBP1-206ENST00000467681 AMHP03971 560 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 RINT1Q6NUQ1 792 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 C1orf186Q6ZWK4 172 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 HERC6Q8IVU3 1022 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
SSBP1-206ENST00000467681 KCNG4Q8TDN1 519 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 ASAP3Q8TDY4 903 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 NLRP4Q96MN2 994 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 POLR3FQ9H1D9 316 aaPredicted RBP15.12■□□□□ 0.01
SSBP1-206ENST00000467681 GPRC5CQ9NQ84 441 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 ATP6V1DQ9Y5K8 247 aa15.12■□□□□ 0.01
SSBP1-206ENST00000467681 CUTAO60888 179 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 CSDE1O75534 798 aaKnown RBP15.11■□□□□ 0.01
SSBP1-206ENST00000467681 PLA2G4BP0C869 781 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 GLRA2P23416 452 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 PTENP60484 403 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 DEFB103AP81534 67 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 TFDP1Q14186 410 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 DSC3Q14574 896 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
SSBP1-206ENST00000467681 AXDND1Q5T1B0 1012 aaPredicted RBP15.11■□□□□ 0.01
SSBP1-206ENST00000467681 FAM102BQ5T8I3 360 aa15.11■□□□□ 0.01
SSBP1-206ENST00000467681 GPR153Q6NV75 609 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms