RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 WASF3Q9UPY6 502 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 OAS3Q9Y6K5 1087 aaKnown RBP5.29□□□□□ -1.56
VPS13A-209ENST00000467124 LOC102724159A0A0B4J2E5 919 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PTGS1P23219 599 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 MC3RP41968 323 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 ZNF200P98182 395 aaPredicted RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PFKPQ01813 784 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 ALDH6A1Q02252 535 aaKnown RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 GTF2H3Q13889 308 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 BRD3Q15059 726 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PWP2Q15269 919 aaKnown RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 MUM1Q2TAK8 710 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 GORABQ5T7V8 394 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 KIAA1841Q6NSI8 718 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 LILRA6Q6PI73 481 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 B3GNT9Q6UX72 402 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 CD300LDQ6UXZ3 194 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 TMC6Q7Z403 805 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 MORC4Q8TE76 937 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PARD3BQ8TEW8 1205 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 AUTS2Q8WXX7 1259 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 SSH1Q8WYL5 1049 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 DPF2Q92785 391 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 RUNDC1Q96C34 613 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 ZSWIM3Q96MP5 696 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 TAAR9Q96RI9 348 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 ACO2Q99798 780 aaKnown RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PRDM11Q9NQV5 511 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
VPS13A-209ENST00000467124 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 KLHL14Q9P2G3 628 aa5.28□□□□□ -1.56
VPS13A-209ENST00000467124 PEX10O60683 326 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 PAPLNO95428 1278 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 NBPF7P0C2Y1 421 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 NCKAP1LP55160 1127 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 ROM1Q03395 351 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 TARBP2Q15633 366 aaKnown RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 PROSER1Q86XN7 944 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 THEMISQ8N1K5 641 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 SLC35G2Q8TBE7 412 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 NRG4Q8WWG1 115 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 RIN2Q8WYP3 895 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 RAB24Q969Q5 203 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 DDX11Q96FC9 970 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 WRNIP1Q96S55 665 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 FOXB1Q99853 325 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 ACE2Q9BYF1 805 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 MTG2Q9H4K7 406 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 ZNF552Q9H707 407 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-209ENST00000467124 KCNK12Q9HB15 430 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 INCENPQ9NQS7 918 aa5.27□□□□□ -1.57
VPS13A-209ENST00000467124 MYPNQ86TC9 1320 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 PLEKHD1A6NEE1 506 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 CCDC154A6NI56 674 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 MAFO75444 373 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 LDHAP00338 332 aaKnown RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 PFKMP08237 780 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 POU2F2P09086 479 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 U2AF1L5P0DN76 240 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 NKX3-2P78367 333 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 MRPS9P82933 396 aaKnown RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 U2AF1Q01081 240 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 HDAC1Q13547 482 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 GBX1Q14549 363 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 MBNL2Q5VZF2 373 aaKnown RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 VASNQ6EMK4 673 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 GAREM2Q75VX8 874 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 SKAP1Q86WV1 359 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 CAMKK1Q8N5S9 505 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 KAT5Q92993 513 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 HPS3Q969F9 1004 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 COA7Q96BR5 231 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 RAX2Q96IS3 184 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 NUP88Q99567 741 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 TACO1Q9BSH4 297 aaKnown RBP5.26□□□□□ -1.57
VPS13A-209ENST00000467124 MYH16Q9H6N6 1097 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 USP25Q9UHP3 1055 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 LIMCH1Q9UPQ0 1083 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 PCDHGB6Q9Y5F9 930 aa5.26□□□□□ -1.57
VPS13A-209ENST00000467124 MAFGO15525 162 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 SEMA7AO75326 666 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 C8BP07358 591 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 IFIT2P09913 472 aaKnown RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 NCAM1P13591 858 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 TRIM27P14373 513 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 VCAM1P19320 739 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 PDCP20941 246 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 FBLN1P23142 703 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 ADCY8P40145 1251 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 ECE1P42892 770 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 SLC5A3P53794 718 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 ADKP55263 362 aaKnown RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 OS9Q13438 667 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 IL10RAQ13651 578 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms