RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-206	ENST00000466971	LUC7L2	Q9Y383	392 aa	Known RBP	5.27	□□□□□ -1.57
NFX1-206	ENST00000466971	SAMM50	Q9Y512	469 aa		5.27	□□□□□ -1.57
NFX1-206	ENST00000466971	PCDHA10	Q9Y5I2	948 aa		5.27	□□□□□ -1.57
NFX1-206	ENST00000466971	OTOF	Q9HC10	1997 aa		5.27	□□□□□ -1.57
NFX1-206	ENST00000466971	PTPRF	P10586	1907 aa		5.27	□□□□□ -1.57
NFX1-206	ENST00000466971	PHLPP2	Q6ZVD8	1323 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	COL11A1	P12107	1806 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GTPBP10	A4D1E9	387 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SPATA31C2	B4DYI2	1134 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ADM5	C9JUS6	153 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TRAF5	O00463	557 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	PES1	O00541	588 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	DHX15	O43143	795 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TEX33	O43247	280 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CHMP2A	O43633	222 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GCNT3	O95395	438 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GYPC	P04921	128 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	EPB41	P11171	864 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MYCL	P12524	364 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TNNT1	P13805	278 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TRIM21	P19474	475 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	YWHAB	P31946	246 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CYLC1	P35663	651 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SMTN	P53814	917 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	PMS1	P54277	932 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	RTP1	P59025	263 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	KRT83	P78385	493 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CCNA1	P78396	465 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ZBED6	P86452	979 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CYP4A11	Q02928	519 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ENPEP	Q07075	957 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	RBL2	Q08999	1139 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	NR1H3	Q13133	447 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ADAM9	Q13443	819 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SNAPC2	Q13487	334 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TUBB2A	Q13885	445 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CTTN	Q14247	550 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	NEDD9	Q14511	834 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	PLS1	Q14651	629 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	PPP2R5A	Q15172	486 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GPR162	Q16538	588 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CCDC40	Q4G0X9	1142 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	HSP90AA4P	Q58FG1	418 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ARSH	Q5FYA8	562 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CEP135	Q66GS9	1140 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MIS18BP1	Q6P0N0	1132 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GADL1	Q6ZQY3	521 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ZNF662	Q6ZS27	426 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	LRRC55	Q6ZSA7	311 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	USP37	Q86T82	979 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	IRF2BP1	Q8IU81	584 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CREBRF	Q8IUR6	639 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SLC9A9	Q8IVB4	645 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	FAM178B	Q8IXR5	827 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	EXOC8	Q8IYI6	725 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	CCDC170	Q8IYT3	715 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ANKRD35	Q8N283	1001 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	FAM160A2	Q8N612	972 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MYCT1	Q8N699	235 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MCPH1	Q8NEM0	835 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	OR8K1	Q8NGG5	319 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SCFD1	Q8WVM8	642 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	KCNN1	Q92952	543 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	GJA10	Q969M2	543 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	VTI1A	Q96AJ9	217 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	PPP1R13B	Q96KQ4	1090 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TUBB2B	Q9BVA1	445 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SPATC1L	Q9H0A9	340 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	NDST4	Q9H3R1	872 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	ZHX3	Q9H4I2	956 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	JPH1	Q9HDC5	661 aa	Predicted RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	LUC7L	Q9NQ29	371 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	A1CF	Q9NQ94	594 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	RGL1	Q9NZL6	768 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MYO1A	Q9UBC5	1043 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	MYO6	Q9UM54	1294 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	SCAF8	Q9UPN6	1271 aa	Known RBP	5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	EXOC7	Q9UPT5	735 aa		5.26	□□□□□ -1.57
NFX1-206	ENST00000466971	DYNC1I1	O14576	645 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	KIAA0391	O15091	583 aa	Known RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	MAPK13	O15264	365 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	N4BP1	O75113	896 aa	Known RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	DGAT1	O75907	488 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	FBXO45	P0C2W1	286 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	CETP	P11597	493 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	XRCC5	P13010	732 aa	Known RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	PLS3	P13797	630 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	RFX1	P22670	979 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	NR2F2	P24468	414 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	EDNRB	P24530	442 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	ANXA13	P27216	316 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	HNRNPH3	P31942	346 aa	Known RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	CASP14	P31944	242 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	KRT9	P35527	623 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	PSMC2	P35998	433 aa	Known RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	GCLC	P48506	637 aa	Predicted RBP	5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	RARRES1	P49788	294 aa		5.25	□□□□□ -1.57
NFX1-206	ENST00000466971	ADK	P55263	362 aa	Known RBP	5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms