RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 KCNAB2Q13303 367 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 TTF1Q15361 905 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 WWC2Q6AWC2 1192 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 MCM10Q7L590 875 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 IFNL2Q8IZJ0 200 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 CPXCR1Q8N123 301 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 GABPB2Q8TAK5 448 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 TRMT2BQ96GJ1 504 aaKnown RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 NCAPGQ9BPX3 1015 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 GTPBP4Q9BZE4 634 aaKnown RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 AP5M1Q9H0R1 490 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 KANSL2Q9H9L4 492 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 FANCLQ9NW38 375 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 RWDD3Q9Y3V2 267 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 TIMM13Q9Y5L4 95 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 PLB1Q6P1J6 1458 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 TSPOAP1O95153 1857 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 EEA1Q15075 1411 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 ASXL2Q76L83 1435 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 CCP110O43303 1012 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 ALDH1L1O75891 902 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 RHOBTB3O94955 611 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 THBDP07204 575 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 SETSIPP0DME0 302 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 HOXA5P20719 270 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 ETFBP38117 255 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 SARSP49591 514 aaKnown RBP6.53□□□□□ -1.36
LRCH3-212ENST00000466845 EPHB1P54762 984 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 MECOMQ03112 1051 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 MROH9Q5TGP6 573 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 CDCA2Q69YH5 1023 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-212ENST00000466845 RASGRP2Q7LDG7 609 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 B3GNT8Q7Z7M8 397 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 RIOX2Q8IUF8 465 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 OR8H2Q8N162 312 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 NPLOC4Q8TAT6 608 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 C17orf50Q8WW18 174 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 TEX13AQ9BXU3 409 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-212ENST00000466845 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 RRP15Q9Y3B9 282 aaKnown RBP6.53□□□□□ -1.36
LRCH3-212ENST00000466845 DAAM1Q9Y4D1 1078 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 KDM6BO15054 1643 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 PRXQ9BXM0 1461 aa6.53□□□□□ -1.36
LRCH3-212ENST00000466845 ZCCHC11Q5TAX3 1644 aaKnown RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SHTN1A0MZ66 631 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 ANKRD18BA2A2Z9 1011 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SMTNL1A8MU46 457 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SLC27A2O14975 620 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PIP5K1CO60331 668 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PPP1R11O60927 126 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 FUCA1P04066 466 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 ASGR2P07307 311 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 UBA7P41226 1012 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SLC6A11P48066 632 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 NCKAP1LP55160 1127 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 UBASH3AP57075 661 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 RPL11P62913 178 aaKnown RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 EIF2B5Q13144 721 aaKnown RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 BIRC3Q13489 604 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PUM3Q15397 648 aaKnown RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PTPN14Q15678 1187 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 ANO1Q5XXA6 986 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 UNC5DQ6UXZ4 953 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 KIAA0907Q7Z7F0 614 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 ANKRD42Q8N9B4 389 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 GIMAP8Q8ND71 665 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 TDRD7Q8NHU6 1098 aaKnown RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 TTC8Q8TAM2 541 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PLEKHO2Q8TD55 490 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SEC14L1Q92503 715 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 DIO2Q92813 273 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 FAM126AQ9BYI3 521 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 TSPYL1Q9H0U9 437 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 OSBPL5Q9H0X9 879 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 RPAP3Q9H6T3 665 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-212ENST00000466845 ZNF408Q9H9D4 720 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 TPCN1Q9ULQ1 816 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 PMF1-BGLAPU3KQ54 211 aa6.52□□□□□ -1.37
LRCH3-212ENST00000466845 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-212ENST00000466845 SNX2O60749 519 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 TRIM13O60858 407 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 ITGAVP06756 1048 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 CAPN2P17655 700 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 POU3F3P20264 500 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-212ENST00000466845 SH3BGRP55822 239 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-212ENST00000466845 CACNB2Q08289 660 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-212ENST00000466845 COX10Q12887 443 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 SLMAPQ14BN4 828 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 CHRNA2Q15822 529 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 LVRNQ6Q4G3 990 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 ZNF227Q86WZ6 799 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 TEX9Q8N6V9 391 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
LRCH3-212ENST00000466845 JPH3Q8WXH2 748 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms