RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 FOXO4P98177 505 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 SPIDRQ14159 915 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 MINDY4Q4G0A6 757 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 KANK2Q63ZY3 851 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 LRSAM1Q6UWE0 723 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 PRR23BQ6ZRT6 265 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 BMP8AQ7Z5Y6 402 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 C14orf80Q86SX3 495 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 LYSMD2Q8IV50 215 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 SLC41A1Q8IVJ1 513 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 CDYL2Q8N8U2 506 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 FATE1Q969F0 183 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 C11orf84Q9BUA3 381 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 MCOLN1Q9GZU1 580 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 QRSL1Q9H0R6 528 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 KCTD10Q9H3F6 313 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 RBPJLQ9UBG7 517 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 FTSJ1Q9UET6 329 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 NRP2O60462 931 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 OPHN1O60890 802 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 LPLP06858 475 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 ATF3P18847 181 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 LGALS4P56470 323 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 TBX4P57082 545 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 HTRA3P83110 453 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 ADAM9Q13443 819 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 DGKDQ16760 1214 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 MBNL2Q5VZF2 373 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 CCSAPQ6IQ19 270 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 IGDCC3Q8IVU1 814 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 CCAR1Q8IX12 1150 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 MIER2Q8N344 545 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 FBXO15Q8NCQ5 510 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 GAB3Q8WWW8 586 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 HIST1H2AHQ96KK5 128 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 HIST1H2AJQ99878 128 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 GORASP1Q9BQQ3 440 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 MTG2Q9H4K7 406 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 KCND1Q9NSA2 647 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 ZFP69BQ9UJL9 534 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 FBXO10Q9UK96 956 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 NOB1Q9ULX3 412 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 EDARQ9UNE0 448 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 PCDHB6Q9Y5E3 794 aa5.71□□□□□ -1.5
CDC42BPA-211ENST00000466538 PCDH8O95206 1070 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 XPAP23025 273 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 MC3RP41968 323 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 GLRBP48167 497 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 NCKAP1LP55160 1127 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 IL13RA1P78552 427 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 RRP12Q5JTH9 1297 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 TPH2Q8IWU9 490 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 KCNN1Q92952 543 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 CLIP3Q96DZ5 547 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 NOL10Q9BSC4 688 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 TACO1Q9BSH4 297 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 HAPLN2Q9GZV7 340 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 DPP7Q9UHL4 492 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 RCAN3Q9UKA8 241 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 CDY2AQ9Y6F7 541 aa5.7□□□□□ -1.5
CDC42BPA-211ENST00000466538 LRRC10BA6NIK2 292 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 ERC2O15083 957 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 NDUFS2O75306 463 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 OSMP13725 252 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 HSPA6P17066 643 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 C5AR1P21730 350 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 LPOP22079 712 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 GNALP38405 381 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 CD83Q01151 205 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 MLANAQ16655 118 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 MAN2A1Q16706 1144 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 WDR72Q3MJ13 1102 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 GJC2Q5T442 439 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 GRAMD4Q6IC98 578 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 FAM180AQ6UWF9 173 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 EPM2AIP1Q7L775 607 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 STPG3Q8N7X2 389 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 GCM1Q9NP62 436 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 USP18Q9UMW8 372 aa5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-211ENST00000466538 CCDC194A0A1B0GVG4 234 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 PRPF3O43395 683 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 KNG1P01042 644 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 POU2F2P09086 479 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 WASP42768 502 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 SLC16A1P53985 500 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 NRG3P56975 720 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 DLG4P78352 724 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 PPARAQ07869 468 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms