RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 HIDE1A8MVS5 230 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 GAS7O60861 476 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 PSMD10O75832 226 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
COL6A1-203ENST00000466285 TARBP2Q15633 366 aaKnown RBP23.26■■□□□ 1.31
COL6A1-203ENST00000466285 DUSP6Q16828 381 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 B3GNT9Q6UX72 402 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 FAM167AQ96KS9 214 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 TLE6Q9H808 572 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 PCDHB12Q9Y5F1 795 aa23.26■■□□□ 1.31
COL6A1-203ENST00000466285 NLRP5P59047 1200 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 STK3Q13188 491 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 HERC4Q5GLZ8 1057 aaPredicted RBP23.25■■□□□ 1.31
COL6A1-203ENST00000466285 ECHDC2Q86YB7 292 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 RNF169Q8NCN4 708 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 MICAL1Q8TDZ2 1067 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 MAP7D2Q96T17 732 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 APOL5Q9BWW9 433 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 TMEM117Q9H0C3 514 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 ELAC1Q9H777 363 aaKnown RBP23.25■■□□□ 1.31
COL6A1-203ENST00000466285 ZSWIM6Q9HCJ5 1215 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 CEP131Q9UPN4 1083 aa23.25■■□□□ 1.31
COL6A1-203ENST00000466285 SLC37A4O43826 429 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 DARSP14868 501 aaKnown RBP23.24■■□□□ 1.31
COL6A1-203ENST00000466285 EIF4BP23588 611 aaKnown RBP23.24■■□□□ 1.31
COL6A1-203ENST00000466285 KCNC3Q14003 757 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 CSPP1Q1MSJ5 1256 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 MCTP2Q6DN12 878 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 ZNF598Q86UK7 904 aaKnown RBP23.24■■□□□ 1.31
COL6A1-203ENST00000466285 ETNPPLQ8TBG4 499 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 FEZF2Q8TBJ5 459 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 BICD2Q8TD16 824 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 RIT2Q99578 217 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 TEKT3Q9BXF9 490 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 GJB4Q9NTQ9 266 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 SEPT9Q9UHD8 586 aaPredicted RBP23.24■■□□□ 1.31
COL6A1-203ENST00000466285 PCDHA4Q9UN74 947 aa23.24■■□□□ 1.31
COL6A1-203ENST00000466285 MEIS3P2A8K0S8 358 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 LOC730098B7Z3J9 87 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 MAGEB2O15479 319 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 LAG3P18627 525 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 UBE3AQ05086 875 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 PLA2G4FQ68DD2 849 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 LLGL2Q6P1M3 1020 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 TMEM173Q86WV6 379 aaPredicted RBP23.23■■□□□ 1.31
COL6A1-203ENST00000466285 HELQQ8TDG4 1101 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 PPP2R3CQ969Q6 453 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 POP1Q99575 1024 aaKnown RBP23.23■■□□□ 1.31
COL6A1-203ENST00000466285 TCF25Q9BQ70 676 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 KCNJ14Q9UNX9 436 aa23.23■■□□□ 1.31
COL6A1-203ENST00000466285 PIEZO1Q92508 2521 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 USP11P51784 963 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 LONRF3Q496Y0 759 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 Q4G0T1 1027 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 KCNT2Q6UVM3 1135 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 MIER3Q7Z3K6 550 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 LRRC43Q8N309 656 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 SUSD6Q92537 303 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 MRPS27Q92552 414 aaKnown RBP23.22■■□□□ 1.31
COL6A1-203ENST00000466285 MBOAT7Q96N66 472 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 SH3GLB2Q9NR46 395 aa23.22■■□□□ 1.31
COL6A1-203ENST00000466285 EML1O00423 815 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 B4GALT3O60512 393 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 SP100P23497 879 aaPredicted RBP23.21■■□□□ 1.31
COL6A1-203ENST00000466285 PSMA5P28066 241 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 JAK3P52333 1124 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 TBC1D8BQ0IIM8 1120 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 ODR4Q5SWX8 454 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 SYCE2Q6PIF2 218 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 KSR1Q8IVT5 923 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 ZNF579Q8NAF0 562 aaKnown RBP23.21■■□□□ 1.31
COL6A1-203ENST00000466285 NLRP7Q8WX94 980 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 LPPQ93052 612 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 FBXL18Q96ME1 805 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 SCLT1Q96NL6 688 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 AAASQ9NRG9 546 aa23.21■■□□□ 1.31
COL6A1-203ENST00000466285 WRAP73Q9P2S5 460 aaPredicted RBP23.21■■□□□ 1.31
COL6A1-203ENST00000466285 CYP3A7-CYP3A51PA0A087WV96 503 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 NT5C1B-RDH14C9J2C7 533 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 CYP3A7P24462 503 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 PLCB3Q01970 1234 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 SSRP1Q08945 709 aaKnown RBP23.2■■□□□ 1.3
COL6A1-203ENST00000466285 CBX2Q14781 532 aaPredicted RBP23.2■■□□□ 1.3
COL6A1-203ENST00000466285 INF2Q27J81 1249 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 BLIDQ8IZY5 108 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 SLC39A11Q8N1S5 342 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 DAGLBQ8NCG7 672 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 BCL7CQ8WUZ0 217 aaPredicted RBP23.2■■□□□ 1.3
COL6A1-203ENST00000466285 RPGRIP1Q96KN7 1286 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 S1PR5Q9H228 398 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 ENTPD7Q9NQZ7 604 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 NRBP2Q9NSY0 501 aa23.2■■□□□ 1.3
COL6A1-203ENST00000466285 A0A087WZ62 844 aa23.19■■□□□ 1.3
COL6A1-203ENST00000466285 IGKV6-21A0A0C4DH24 114 aa23.19■■□□□ 1.3
COL6A1-203ENST00000466285 REC8O95072 547 aa23.19■■□□□ 1.3
COL6A1-203ENST00000466285 SFNP31947 248 aa23.19■■□□□ 1.3
COL6A1-203ENST00000466285 ZNF558Q96NG5 402 aa23.19■■□□□ 1.3
COL6A1-203ENST00000466285 FDXACB1Q9BRP7 624 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms