RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SLC7A3Q8WY07 619 aa11.38□□□□□ -0.59
CD40-204ENST00000466205 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
CD40-204ENST00000466205 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
CD40-204ENST00000466205 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
CD40-204ENST00000466205 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
CD40-204ENST00000466205 SQORQ9Y6N5 450 aa11.38□□□□□ -0.59
CD40-204ENST00000466205 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 IGKV6-21A0A0C4DH24 114 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 PP2D1A8MPX8 630 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 USO1O60763 962 aaKnown RBP11.37□□□□□ -0.59
CD40-204ENST00000466205 SRGAP2CP0DJJ0 459 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 PTGDRQ13258 359 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
CD40-204ENST00000466205 EMC2Q15006 297 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 LONRF3Q496Y0 759 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 CATSPER3Q86XQ3 398 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 C4orf32Q8N8J7 132 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 RNF169Q8NCN4 708 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 TGS1Q96RS0 853 aaKnown RBP11.37□□□□□ -0.59
CD40-204ENST00000466205 MTRQ99707 1265 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 HSD17B14Q9BPX1 270 aa11.37□□□□□ -0.59
CD40-204ENST00000466205 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 FGFR1P11362 822 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 DARSP14868 501 aaKnown RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 EIF4BP23588 611 aaKnown RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 CDC25AP30304 524 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 RFC5P40937 340 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 TRAPPC10P48553 1259 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 RARRES1P49788 294 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 ERVK-21P61565 698 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 CUL4AQ13619 759 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 IL17AQ16552 155 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 ECM1Q16610 540 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 NPAS4Q8IUM7 802 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 FIBCD1Q8N539 461 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 NEK9Q8TD19 979 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
CD40-204ENST00000466205 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 COL4A3BPQ9Y5P4 624 aa11.36□□□□□ -0.59
CD40-204ENST00000466205 ARID2Q68CP9 1835 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 LPXNO60711 386 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 DGKIO75912 1065 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 CTNNB1P35222 781 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 ORC2Q13416 577 aaPredicted RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 EPC2Q52LR7 807 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 ODR4Q5SWX8 454 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 RNF149Q8NC42 400 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 ERMNQ8TAM6 284 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 ASAP3Q8TDY4 903 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 SNX29Q8TEQ0 813 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 PRPF31Q8WWY3 499 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 ZNF689Q96CS4 500 aaPredicted RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 GPRC5CQ9NQ84 441 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 LRWD1Q9UFC0 647 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 PIN4Q9Y237 131 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
CD40-204ENST00000466205 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
CD40-204ENST00000466205 TBKBP1A7MCY6 615 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 C9IYK1 514 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 DSC3Q14574 896 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 SPOUT1Q5T280 376 aaKnown RBP11.34□□□□□ -0.59
CD40-204ENST00000466205 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 SLC24A5Q71RS6 500 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 ZNF410Q86VK4 478 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD40-204ENST00000466205 TMEM192Q8IY95 271 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 PLIN2Q99541 437 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 POLR3FQ9H1D9 316 aaPredicted RBP11.34□□□□□ -0.59
CD40-204ENST00000466205 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms