RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 SENP6Q9GZR1 1112 aaPredicted RBP12.36□□□□□ -0.43
VCP-204ENST00000466100 POLD4Q9HCU8 107 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
VCP-204ENST00000466100 LAMA2P24043 3122 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 GLRA2P23416 452 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 ASIC1P78348 528 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 COASYQ13057 564 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 KCNB1Q14721 858 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 FAM47CQ5HY64 1035 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 FAM102BQ5T8I3 360 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 IER5Q5VY09 327 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 FAM126BQ8IXS8 530 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 KIAA0319LQ8IZA0 1049 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 RETREG2Q8NC44 543 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 C11orf49Q9H6J7 331 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 TRMT13Q9NUP7 481 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
VCP-204ENST00000466100 HOOK1Q9UJC3 728 aaKnown RBP12.35□□□□□ -0.43
VCP-204ENST00000466100 B4GALT4O60513 344 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
VCP-204ENST00000466100 RHOBTB3O94955 611 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 CD4P01730 458 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 KRT18P05783 430 aaKnown RBP12.34□□□□□ -0.43
VCP-204ENST00000466100 CYP2C9P11712 490 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 MAEAQ7L5Y9 396 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 ANKRD33Q7Z3H0 272 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 SFR1Q86XK3 245 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
VCP-204ENST00000466100 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 SUGCTQ9HAC7 445 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 PARVGQ9HBI0 331 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 OLFML3Q9NRN5 406 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
VCP-204ENST00000466100 ADGRA3Q8IWK6 1321 aa12.34□□□□□ -0.43
VCP-204ENST00000466100 SCN5AQ14524 2016 aa12.33□□□□□ -0.43
VCP-204ENST00000466100 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 FAM13AO94988 1023 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 SMC2O95347 1197 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 PLS3P13797 630 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 IDEP14735 1019 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 GAP43P17677 238 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 BMP6P22004 513 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
VCP-204ENST00000466100 RBL2Q08999 1139 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 PTK7Q13308 1070 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 CAPSQ13938 189 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 PTGISQ16647 500 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 TRIM60Q495X7 471 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 NECAB2Q7Z6G3 386 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 CCDC65Q8IXS2 484 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 DNAJB3Q8WWF6 145 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 PRPF31Q8WWY3 499 aaKnown RBP12.33□□□□□ -0.44
VCP-204ENST00000466100 KCNN1Q92952 543 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 SMARCE1Q969G3 411 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
VCP-204ENST00000466100 FGFBP2Q9BYJ0 223 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 C17orf75Q9HAS0 396 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 SEL1LQ9UBV2 794 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 CEP290O15078 2479 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 MROH7Q68CQ1 1323 aa12.33□□□□□ -0.44
VCP-204ENST00000466100 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 PPP1R37O75864 691 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 VTNP04004 478 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 TMOD1P28289 359 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 NAMPTP43490 491 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 NPTX2P47972 431 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 DNM2P50570 870 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 GPC3P51654 580 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 NCKAP1LP55160 1127 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 MGAT3Q09327 533 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 MORC3Q14149 939 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 MXD4Q14582 209 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms