RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TCTN1Q2MV58 587 aa10.67□□□□□ -0.7
ATG3-203ENST00000465980 TRIM71Q2Q1W2 868 aaKnown RBP10.67□□□□□ -0.7
ATG3-203ENST00000465980 ZNF618Q5T7W0 954 aa10.67□□□□□ -0.7
ATG3-203ENST00000465980 METTL7BQ6UX53 244 aa10.67□□□□□ -0.7
ATG3-203ENST00000465980 ATP6V0A1Q93050 837 aa10.67□□□□□ -0.7
ATG3-203ENST00000465980 SLC9A7Q96T83 725 aa10.67□□□□□ -0.7
ATG3-203ENST00000465980 TUT1Q9H6E5 874 aaKnown RBP10.67□□□□□ -0.7
ATG3-203ENST00000465980 C17orf102A2RUQ5 167 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 SPDYE3A6NKU9 549 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 RFXAPO00287 272 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 TREHO43280 583 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 MMP1P03956 469 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 CTSHP09668 335 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 ICAM3P32942 547 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 THPOP40225 353 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 NAPAP54920 295 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
ATG3-203ENST00000465980 DEFB103AP81534 67 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 RBL2Q08999 1139 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 MBTPS1Q14703 1052 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 CNKSR3Q6P9H4 555 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 FERMT3Q86UX7 667 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 HERC6Q8IVU3 1022 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
ATG3-203ENST00000465980 PGBD1Q96JS3 809 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
ATG3-203ENST00000465980 GPR20Q99678 358 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 GJB4Q9NTQ9 266 aa10.66□□□□□ -0.7
ATG3-203ENST00000465980 hCG_1984214I3L0E3 225 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 ATP9AO75110 1047 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 BAIAP3O94812 1187 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 ITGB5P18084 799 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 MCM4P33991 863 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.7
ATG3-203ENST00000465980 MCTP1Q6DN14 999 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 BRAPQ7Z569 592 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 SPRED2Q7Z698 418 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 ZNF713Q8N859 430 aaPredicted RBP10.65□□□□□ -0.7
ATG3-203ENST00000465980 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 SETD4Q9NVD3 440 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 VPS54Q9P1Q0 977 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 ZNF215Q9UL58 517 aaPredicted RBP10.65□□□□□ -0.7
ATG3-203ENST00000465980 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 PCDHA8Q9Y5H6 950 aa10.65□□□□□ -0.7
ATG3-203ENST00000465980 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 KIF28PB7ZC32 967 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 CXCL10P02778 98 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 KCNA2P16389 499 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.71
ATG3-203ENST00000465980 MARK3P27448 753 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
ATG3-203ENST00000465980 ADCY7P51828 1080 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 ARHGAP4P98171 946 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 KRT76Q01546 638 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 TAP1Q03518 808 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 CBLBQ13191 982 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 MTMR1Q13613 665 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 GPR161Q8N6U8 529 aaKnown RBP10.64□□□□□ -0.71
ATG3-203ENST00000465980 LMBR1Q8WVP7 490 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 EHMT1Q9H9B1 1298 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 BARHL2Q9NY43 387 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 KCNJ14Q9UNX9 436 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 GPSM3Q9Y4H4 160 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 ATG2AQ2TAZ0 1938 aa10.64□□□□□ -0.71
ATG3-203ENST00000465980 RSPH10B2B2RC85 870 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 STXBP3O00186 592 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 LGR5O75473 907 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 RSPH10BP0C881 870 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 HOXC8P31273 242 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 IKBKEQ14164 716 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 SKIV2LQ15477 1246 aaKnown RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 ATL3Q6DD88 541 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 ZBTB33Q86T24 672 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 DIS3L2Q8IYB7 885 aaKnown RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 GIMAP8Q8ND71 665 aaPredicted RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 PHOSPHO2Q8TCD6 241 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 CCDC12Q8WUD4 166 aaPredicted RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
ATG3-203ENST00000465980 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 TMEM260Q9NX78 707 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 UBIAD1Q9Y5Z9 338 aa10.63□□□□□ -0.71
ATG3-203ENST00000465980 EMSYQ7Z589 1322 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms