RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
CNOT4-208ENST00000465721 NR2E1Q9Y466 385 aa13.38□□□□□ -0.27
CNOT4-208ENST00000465721 C2orf71A6NGG8 1288 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 HOXA2O43364 376 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 CLCN3P51790 818 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 UBALD2Q8IYN6 164 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 SLC39A11Q8N1S5 342 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-208ENST00000465721 TMEM105Q8N8V8 129 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-208ENST00000465721 CASP10Q92851 521 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 BARHL2Q9NY43 387 aa13.37□□□□□ -0.27
CNOT4-208ENST00000465721 MAFBQ9Y5Q3 323 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-208ENST00000465721 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
CNOT4-208ENST00000465721 OTOGLQ3ZCN5 2332 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
CNOT4-208ENST00000465721 CLASP2O75122 1294 aaKnown RBP13.36□□□□□ -0.27
CNOT4-208ENST00000465721 ITIH3Q06033 890 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
CNOT4-208ENST00000465721 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
CNOT4-208ENST00000465721 ECHDC2Q86YB7 292 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 METTL13Q8N6R0 699 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 NECTIN4Q96NY8 510 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 ADAM7Q9H2U9 754 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 RBM28Q9NW13 759 aaKnown RBP13.36□□□□□ -0.27
CNOT4-208ENST00000465721 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
CNOT4-208ENST00000465721 TDRD15B5MCY1 1934 aaKnown RBP13.35□□□□□ -0.27
CNOT4-208ENST00000465721 ARID2Q68CP9 1835 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 CYP3A4P08684 503 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 ZNF76P36508 570 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 NBL1P41271 181 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 KRT17Q04695 432 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 NECTIN1Q15223 517 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 CES5AQ6NT32 575 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 ZNF746Q6NUN9 644 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-208ENST00000465721 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
CNOT4-208ENST00000465721 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
CNOT4-208ENST00000465721 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 ADAMTS3O15072 1205 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 ASGR2P07307 311 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 EIF4BP23588 611 aaKnown RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 NLRP11P59045 1033 aaKnown RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 RTN1Q16799 776 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 LRRC71Q8N4P6 559 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 RNF169Q8NCN4 708 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 ESYT1Q9BSJ8 1104 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 ZNF577Q9BSK1 485 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
CNOT4-208ENST00000465721 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-208ENST00000465721 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 MAGEB2O15479 319 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 ZNF862O60290 1169 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 DARSP14868 501 aaKnown RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 MTHFRP42898 656 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 GPC3P51654 580 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 BCAR1P56945 870 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 EFCAB12Q6NXP0 572 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 TMEM173Q86WV6 379 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 ZDHHC14Q8IZN3 488 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 LENG9Q96B70 501 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-208ENST00000465721 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 ZBP1Q9H171 429 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 TBC1D22BQ9NU19 505 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 DZANK1Q9NVP4 752 aa13.33□□□□□ -0.28
CNOT4-208ENST00000465721 GABBR1Q9UBS5 961 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms