RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 NOC2LQ9Y3T9 749 aaKnown RBP13.79□□□□□ -0.2
CHPF2-202ENST00000465601 SRPRBQ9Y5M8 271 aaKnown RBP13.79□□□□□ -0.2
CHPF2-202ENST00000465601 SQORQ9Y6N5 450 aa13.79□□□□□ -0.2
CHPF2-202ENST00000465601 GBF1Q92538 1859 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 TTC3P53804 2025 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 SZT2Q5T011 3432 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 WDR5P61964 334 aaKnown RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 DNM1Q05193 864 aaKnown RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 GRB10Q13322 594 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 HYIQ5T013 277 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 USP49Q70CQ1 688 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 PSPC1Q8WXF1 523 aaKnown RBP13.78□□□□□ -0.2
CHPF2-202ENST00000465601 CDK5RAP3Q96JB5 506 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 MYH11P35749 1972 aa13.78□□□□□ -0.2
CHPF2-202ENST00000465601 A0A087WZ62 844 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 SPTLC2O15270 562 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 GAS2O43903 313 aaKnown RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 CSDE1O75534 798 aaKnown RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 EYA4O95677 639 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 SRGAP2CP0DJJ0 459 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 KCNJ6P48051 423 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 DEFB103AP81534 67 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 CDC42EP1Q00587 391 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 LAMTOR4Q0VGL1 99 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 PAK2Q13177 524 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 APBB2Q92870 758 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 CALML4Q96GE6 196 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 EPSTI1Q96J88 318 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 NT5C3AQ9H0P0 336 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 POLD4Q9HCU8 107 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
CHPF2-202ENST00000465601 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
CHPF2-202ENST00000465601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ASAP2O43150 1006 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 EFCAB14O75071 495 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 YEATS4O95619 227 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 DARSP14868 501 aaKnown RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ATP2A2P16615 1042 aaKnown RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 CYP11B2P19099 503 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 FGFR4P22455 802 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ARL2P36404 184 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 FXR1P51114 621 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 RABGGTBP53611 331 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 KARSQ15046 597 aaKnown RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 TMEM119Q4V9L6 283 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 FAM102BQ5T8I3 360 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ATL3Q6DD88 541 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 TMCO2Q7Z6W1 182 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 RTN4RL1Q86UN2 441 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ASAP3Q8TDY4 903 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-202ENST00000465601 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
CHPF2-202ENST00000465601 ENPP3O14638 875 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 GPR182O15218 404 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 SLC26A4O43511 780 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 PPP6R2O75170 966 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHPF2-202ENST00000465601 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
CHPF2-202ENST00000465601 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
CHPF2-202ENST00000465601 ODR4Q5SWX8 454 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 FAM117BQ6P1L5 589 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 ZNF410Q86VK4 478 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 RNF149Q8NC42 400 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
CHPF2-202ENST00000465601 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
CHPF2-202ENST00000465601 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
CHPF2-202ENST00000465601 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms