RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 GAS2L3Q86XJ1 694 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 METTL13Q8N6R0 699 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 LMBR1Q8WVP7 490 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 BSNDQ8WZ55 320 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 VTI1AQ96AJ9 217 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 HDAC6Q9UBN7 1215 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 COL4A3BPQ9Y5P4 624 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 BRCA2P51587 3418 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 CD44P16070 742 aaKnown RBP19.05■□□□□ 0.64
PTPRU-206ENST00000465525 CLCN3P51790 818 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 EHHADHQ08426 723 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-206ENST00000465525 FAM26FQ5R3K3 315 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 ODR4Q5SWX8 454 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 MARCH8Q5T0T0 291 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 ZNF658Q5TYW1 1059 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-206ENST00000465525 C7orf31Q8N865 590 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 TRIML1Q8N9V2 468 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 KIAA0895Q8NCT3 520 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 MCPH1Q8NEM0 835 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 PARVGQ9HBI0 331 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 ANO10Q9NW15 660 aa19.05■□□□□ 0.64
PTPRU-206ENST00000465525 COL1A2P08123 1366 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 A0A1W2PQ45 241 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-206ENST00000465525 A0A1W2PQY0 241 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 NMT1P30419 496 aaKnown RBP19.04■□□□□ 0.64
PTPRU-206ENST00000465525 CASP5P51878 434 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 ZNF131P52739 623 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 FAM47CQ5HY64 1035 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 EFCAB12Q6NXP0 572 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 MTHFD1LQ6UB35 978 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 ASAP3Q8TDY4 903 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 DRC1Q96MC2 740 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 PCDHA2Q9Y5H9 948 aa19.04■□□□□ 0.64
PTPRU-206ENST00000465525 GAP43P17677 238 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 MNX1P50219 401 aaPredicted RBP19.03■□□□□ 0.64
PTPRU-206ENST00000465525 PEX3P56589 373 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 KLHL10Q6JEL2 608 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 ZNF668Q96K58 619 aaPredicted RBP19.03■□□□□ 0.64
PTPRU-206ENST00000465525 KIFC3Q9BVG8 833 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 TIPINQ9BVW5 301 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 MRPL44Q9H9J2 332 aaKnown RBP19.03■□□□□ 0.64
PTPRU-206ENST00000465525 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
PTPRU-206ENST00000465525 MYBP10242 640 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 PLS3P13797 630 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 PRCPP42785 496 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 ITGA7Q13683 1181 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 KSR1Q8IVT5 923 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 NRCAMQ92823 1304 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 KIFAP3Q92845 792 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 ABHD8Q96I13 439 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 PPP1R16BQ96T49 567 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 STARD7Q9NQZ5 370 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 PPME1Q9Y570 386 aa19.02■□□□□ 0.64
PTPRU-206ENST00000465525 IGKV6-21A0A0C4DH24 114 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 C17orf102A2RUQ5 167 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 RRN3P2A6NIE6 340 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 PPP1R3GB7ZBB8 358 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 GLRA2P23416 452 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 ZC2HC1CQ53FD0 456 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 NFRKBQ6P4R8 1299 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 RUFY4Q6ZNE9 571 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 FAM178BQ8IXR5 827 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 PRPF31Q8WWY3 499 aaKnown RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 SEZ6LQ9BYH1 1024 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 SUCLA2Q9P2R7 463 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 CCDC169A6NNP5 214 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 RBAK-RBAKDNI3L0D1 243 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 SLC16A4O15374 487 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 TREHO43280 583 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 GCNT3O95395 438 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 ARL2P36404 184 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 PSMD2Q13200 908 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 L1TD1Q5T7N2 865 aaKnown RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 RETREG2Q8NC44 543 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 FIZ1Q96SL8 496 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 SENP6Q9GZR1 1112 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 FAM49AQ9H0Q0 323 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 LARSQ9P2J5 1176 aaKnown RBP19.01■□□□□ 0.63
PTPRU-206ENST00000465525 CTNND2Q9UQB3 1225 aa19.01■□□□□ 0.63
PTPRU-206ENST00000465525 KIAA0100Q14667 2235 aaKnown RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 K7ENM7 598 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 MAGEB2O15479 319 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 COL6A1P12109 1028 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 EN2P19622 333 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 NPTX2P47972 431 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 PTPN11Q06124 597 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 DMP1Q13316 513 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 GDF6Q6KF10 455 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 SESTD1Q86VW0 696 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 MLKLQ8NB16 471 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 JPH2Q9BR39 696 aaPredicted RBP19■□□□□ 0.63
PTPRU-206ENST00000465525 OLFML3Q9NRN5 406 aa19■□□□□ 0.63
PTPRU-206ENST00000465525 ADGRA3Q8IWK6 1321 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 LRRIQ4A6NIV6 560 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 PRPF6O94906 941 aaKnown RBP18.99■□□□□ 0.63
PTPRU-206ENST00000465525 VTNP04004 478 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 GNAT1P11488 350 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms