RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 NRIP1P48552 1158 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 NDUFV1P49821 464 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 UBE3AQ05086 875 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 TBC1D8BQ0IIM8 1120 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 MICAL1Q8TDZ2 1067 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 MSLNLQ96KJ4 702 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 NIFKQ9BYG3 293 aaKnown RBP23.5■■□□□ 1.35
CSPG5-204ENST00000465441 RNF19AQ9NV58 838 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 CD207Q9UJ71 328 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 KCNJ14Q9UNX9 436 aa23.5■■□□□ 1.35
CSPG5-204ENST00000465441 FGF18O76093 207 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 ERVFC1P60507 584 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 SCRN1Q12765 414 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 DRP2Q13474 957 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 NONOQ15233 471 aaKnown RBP eCLIP23.49■■□□□ 1.35
CSPG5-204ENST00000465441 MTERF2Q49AM1 385 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 XKR3Q5GH77 459 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 MOXD1Q6UVY6 613 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 FAM177A1Q8N128 213 aaPredicted RBP23.49■■□□□ 1.35
CSPG5-204ENST00000465441 EFHBQ8N7U6 833 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 COLGALT1Q8NBJ5 622 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 ETNPPLQ8TBG4 499 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 CASD1Q96PB1 797 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 CEP89Q96ST8 783 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 TMEM117Q9H0C3 514 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 CLEC1BQ9P126 229 aa23.49■■□□□ 1.35
CSPG5-204ENST00000465441 TMEM150BA6NC51 233 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 DARSP14868 501 aaKnown RBP23.48■■□□□ 1.35
CSPG5-204ENST00000465441 FGFR4P22455 802 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 SMAD4Q13485 552 aaKnown RBP23.48■■□□□ 1.35
CSPG5-204ENST00000465441 INF2Q27J81 1249 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 LRRC55Q6ZSA7 311 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 ECHDC2Q86YB7 292 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 THNSL1Q8IYQ7 743 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 SH2D3AQ9BRG2 576 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 TLE6Q9H808 572 aa23.48■■□□□ 1.35
CSPG5-204ENST00000465441 SEPT9Q9UHD8 586 aaPredicted RBP23.48■■□□□ 1.35
CSPG5-204ENST00000465441 PLXNA4Q9HCM2 1894 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 PER2O15055 1255 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 DTNBO60941 627 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 CSDE1O75534 798 aaKnown RBP23.47■■□□□ 1.35
CSPG5-204ENST00000465441 KRT25Q7Z3Z0 450 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 NLRP7Q8WX94 980 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 TLR9Q9NR96 1032 aa23.47■■□□□ 1.35
CSPG5-204ENST00000465441 DDX25Q9UHL0 483 aaKnown RBP23.47■■□□□ 1.35
CSPG5-204ENST00000465441 IGKV6-21A0A0C4DH24 114 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 DDX11L8A8MPP1 907 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 DCXO43602 365 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 EYA4O95677 639 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 LAG3P18627 525 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 CSPP1Q1MSJ5 1256 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 LETM2Q2VYF4 491 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 SCLT1Q96NL6 688 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 PHF20Q9BVI0 1012 aa23.46■■□□□ 1.35
CSPG5-204ENST00000465441 SLKQ9H2G2 1235 aaPredicted RBP23.46■■□□□ 1.35
CSPG5-204ENST00000465441 HOXA2O43364 376 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 SLC37A4O43826 429 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 GLP2RO95838 553 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 PLA2G5P39877 138 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 PLCB3Q01970 1234 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 FAM122AQ96E09 287 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 GCOM2Q9BZD3 368 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-204ENST00000465441 GJB4Q9NTQ9 266 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 TPCN1Q9ULQ1 816 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 HCN4Q9Y3Q4 1203 aa23.45■■□□□ 1.34
CSPG5-204ENST00000465441 A0A087WZ62 844 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 A0A0U1RQF3 1178 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 PRR33A8MZF0 331 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 EML1O00423 815 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 FSCN2O14926 492 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 CDKL5O76039 1030 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 CDC42EP1Q00587 391 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 COASYQ13057 564 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 PDE12Q6L8Q7 609 aaKnown RBP23.44■■□□□ 1.34
CSPG5-204ENST00000465441 KCNT2Q6UVM3 1135 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 ABI1Q8IZP0 508 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 RNF169Q8NCN4 708 aa23.44■■□□□ 1.34
CSPG5-204ENST00000465441 MRPS27Q92552 414 aaKnown RBP23.44■■□□□ 1.34
CSPG5-204ENST00000465441 FDXACB1Q9BRP7 624 aaPredicted RBP23.44■■□□□ 1.34
CSPG5-204ENST00000465441 BARX2Q9UMQ3 279 aaPredicted RBP23.44■■□□□ 1.34
CSPG5-204ENST00000465441 ARIH1Q9Y4X5 557 aaPredicted RBP23.44■■□□□ 1.34
CSPG5-204ENST00000465441 CCDC194A0A1B0GVG4 234 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 PFKFB2O60825 505 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 MAFO75444 373 aaPredicted RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 EOMESO95936 686 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 DNM2P50570 870 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 PSMC5P62195 406 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 RBM10P98175 930 aaKnown RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 DUSP6Q16828 381 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 CLLU1OSQ5K130 101 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 ANO5Q75V66 913 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 ZNF598Q86UK7 904 aaKnown RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 POP1Q99575 1024 aaKnown RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 SUCLA2Q9P2R7 463 aaPredicted RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 PUF60Q9UHX1 559 aaKnown RBP23.43■■□□□ 1.34
CSPG5-204ENST00000465441 LZTS1Q9Y250 596 aa23.43■■□□□ 1.34
CSPG5-204ENST00000465441 PPP4R3AQ6IN85 833 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 NEK8Q86SG6 692 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 SMRP1Q8NCR6 262 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 OXER1Q8TDS5 423 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms